RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 MUC3BQ9H195 1237 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 LINC00597Q9H2U6 94 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 NOL6Q9H6R4 1146 aaKnown RBP19.03■□□□□ 0.64
SSBP4-212ENST00000601919 KIAA1522Q9P206 1035 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-212ENST00000601919 FAM50BQ9Y247 325 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 CDH23Q9H251 3354 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 GRXCR2A6NFK2 248 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 NEDD8-MDP1E9PL57 170 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 HEXIM1O94992 359 aaKnown RBP19.02■□□□□ 0.64
SSBP4-212ENST00000601919 IFNB1P01574 187 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 KRT14P02533 472 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 MCM3P25205 808 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 RBL1P28749 1068 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 TERF1P54274 439 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 GAD2Q05329 585 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 FCHO2Q0JRZ9 810 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 NR1H3Q13133 447 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 SLC12A1Q13621 1099 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 PTK6Q13882 451 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 EML3Q32P44 896 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 PUS10Q3MIT2 529 aaKnown RBP19.02■□□□□ 0.64
SSBP4-212ENST00000601919 LY6G5CQ5SRR4 150 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 FYB2Q5VWT5 728 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 RNF43Q68DV7 783 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 VITQ6UXI7 678 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 TMEM25Q86YD3 366 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 PLCD3Q8N3E9 789 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 CCDC33Q8N5R6 958 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 GPR161Q8N6U8 529 aaKnown RBP19.02■□□□□ 0.64
SSBP4-212ENST00000601919 FAM71DQ8N9W8 422 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 FIBINQ8TAL6 211 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 BHMTQ93088 406 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 FATE1Q969F0 183 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 RTP4Q96DX8 246 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 HMCESQ96FZ2 354 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 VAT1Q99536 393 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 SLC2A11Q9BYW1 496 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 SP110Q9HB58 689 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 USP29Q9HBJ7 922 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 PCDH9Q9HC56 1237 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 HAUS2Q9NVX0 235 aa19.02■□□□□ 0.64
SSBP4-212ENST00000601919 IPO11Q9UI26 975 aaKnown RBP19.02■□□□□ 0.64
SSBP4-212ENST00000601919 NYNRINQ9P2P1 1898 aaKnown RBP19.01■□□□□ 0.63
SSBP4-212ENST00000601919 MYOFQ9NZM1 2061 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 NDC80O14777 642 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 CTIFO43310 598 aaKnown RBP19.01■□□□□ 0.63
SSBP4-212ENST00000601919 TYRP14679 529 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 SERINC3Q13530 473 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 DHCR24Q15392 516 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 ERCC6LQ2NKX8 1250 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 P3H1Q32P28 736 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 LEXMQ3ZCV2 418 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 RNF219Q5W0B1 726 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-212ENST00000601919 IL31Q6EBC2 164 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 CXorf57Q6NSI4 855 aaKnown RBP19.01■□□□□ 0.63
SSBP4-212ENST00000601919 RHBDF2Q6PJF5 856 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 TP53INP2Q8IXH6 220 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 CPA6Q8N4T0 437 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 NETO2Q8NC67 525 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 ARHGEF2Q92974 986 aaKnown RBP19.01■□□□□ 0.63
SSBP4-212ENST00000601919 P2RY11Q96G91 374 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 XPO6Q96QU8 1125 aaKnown RBP19.01■□□□□ 0.63
SSBP4-212ENST00000601919 KXD1Q9BQD3 176 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 FAM83CQ9BQN1 747 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 ERP44Q9BS26 406 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 PLK2Q9NYY3 685 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 ASIC3Q9UHC3 531 aa19.01■□□□□ 0.63
SSBP4-212ENST00000601919 C5orf60A6NFR6 353 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 ZSCAN5CA6NGD5 496 aaPredicted RBP19■□□□□ 0.63
SSBP4-212ENST00000601919 CHADO15335 359 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 HOXC11O43248 304 aaPredicted RBP19■□□□□ 0.63
SSBP4-212ENST00000601919 MAFKO60675 156 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 CYP17A1P05093 508 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 ADH5P11766 374 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 IL10RBQ08334 325 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 PARM1Q6UWI2 310 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 IFT20Q8IY31 132 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 BBOF1Q8ND07 529 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 NXPE3Q969Y0 559 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 LRRC45Q96CN5 670 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 SPON2Q9BUD6 331 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 TRMT61BQ9BVS5 477 aaKnown RBP19■□□□□ 0.63
SSBP4-212ENST00000601919 PHF7Q9BWX1 381 aaPredicted RBP19■□□□□ 0.63
SSBP4-212ENST00000601919 C10orf88Q9H8K7 445 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 ATP13A1Q9HD20 1204 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 SEPT10Q9P0V9 454 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 PAK5Q9P286 719 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 NOL12Q9UGY1 213 aaKnown RBP eCLIP19■□□□□ 0.63
SSBP4-212ENST00000601919 TRHDEQ9UKU6 1024 aa19■□□□□ 0.63
SSBP4-212ENST00000601919 V9GYY5 206 aaPredicted RBP19■□□□□ 0.63
SSBP4-212ENST00000601919 ANHXE9PGG2 379 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 RNF103O00237 685 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 MATN3O15232 486 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 KDELR3O43731 214 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 OPHN1O60890 802 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 GCATO75600 419 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 NEBLO76041 1014 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 VAV1P15498 845 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 ADCY8P40145 1251 aa18.99■□□□□ 0.63
SSBP4-212ENST00000601919 RENBPP51606 427 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms