RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 ZNF487B1APH4 448 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 RASA4BC9J798 803 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 CBX4O00257 560 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 NCAM2O15394 837 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 RASA4O43374 803 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 MFSD11O43934 449 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 ATP5BP06576 529 aaKnown RBP15.33■□□□□ 0.04
NUP54-213ENST00000513352 PYGMP11217 842 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 ZFXP17010 805 aaPredicted RBP15.33■□□□□ 0.04
NUP54-213ENST00000513352 TIE1P35590 1138 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 TNFRSF4P43489 277 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 COPS2P61201 443 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 TFDP2Q14188 446 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 FNDC3BQ53EP0 1204 aaKnown RBP15.33■□□□□ 0.04
NUP54-213ENST00000513352 C2orf27AQ580R0 203 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 NCBP2-AS2Q69YL0 99 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 ADIPOR2Q86V24 386 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 VSIG1Q86XK7 387 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 CCDC33Q8N5R6 958 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 LZTR1Q8N653 840 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 NPWQ8N729 165 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 PJA1Q8NG27 643 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 CYB5D2Q8WUJ1 264 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 UBE2Q2Q8WVN8 375 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 FAF2Q96CS3 445 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 HMCESQ96FZ2 354 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 LMLNQ96KR4 655 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 NELL2Q99435 816 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 FEM1AQ9BSK4 669 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 C2orf49Q9BVC5 232 aaPredicted RBP15.33■□□□□ 0.04
NUP54-213ENST00000513352 EPHX3Q9H6B9 360 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 LMAN1LQ9HAT1 526 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 ZDHHC4Q9NPG8 344 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 KCND1Q9NSA2 647 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 ELOVL2Q9NXB9 296 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 SLC25A13Q9UJS0 675 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 INTS6Q9UL03 887 aaKnown RBP15.33■□□□□ 0.04
NUP54-213ENST00000513352 JRKLQ9Y4A0 524 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 HEY1Q9Y5J3 304 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 BDP1A6H8Y1 2624 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 A0A0C4DFX4 3053 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 TRIOO75962 3097 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 SHROOM3Q8TF72 1996 aa15.33■□□□□ 0.04
NUP54-213ENST00000513352 NYNRINQ9P2P1 1898 aaKnown RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 K7EQS6 105 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 SNAP91O60641 907 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 CST8O60676 142 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 RNF40O75150 1001 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 MAP3K6O95382 1288 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 CTSOP43234 321 aaPredicted RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 NDST2P52849 883 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 YBEYP58557 167 aaPredicted RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 ST8SIA6P61647 398 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 EIF4HQ15056 248 aaKnown RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 PPP2R5EQ16537 467 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 PARP15Q460N3 678 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 FBXO43Q4G163 708 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 DGKKQ5KSL6 1271 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 EMC10Q5UCC4 262 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 EGFLAMQ63HQ2 1017 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 TMEM215Q68D42 235 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 KIAA0907Q7Z7F0 614 aaPredicted RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 UMODL1-AS1Q8N2C9 162 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 PQLC3Q8N755 202 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 ZNF513Q8N8E2 541 aaPredicted RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 DCAF4L2Q8NA75 395 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 EZH1Q92800 747 aaPredicted RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 ARHGEF2Q92974 986 aaKnown RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 HAUS1Q96CS2 278 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 OSBPL8Q9BZF1 889 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 SLC39A8Q9C0K1 460 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 NOL6Q9H6R4 1146 aaKnown RBP15.32■□□□□ 0.04
NUP54-213ENST00000513352 VPS51Q9UID3 782 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 SIT1Q9Y3P8 196 aa15.32■□□□□ 0.04
NUP54-213ENST00000513352 CHD5Q8TDI0 1954 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 VCANP13611 3396 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 FAM86C2PA6NEL3 165 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 ANTXRLA6NF34 631 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 TIMM44O43615 452 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 KLF8O95600 359 aaPredicted RBP15.31■□□□□ 0.04
NUP54-213ENST00000513352 ASLP04424 464 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
NUP54-213ENST00000513352 DCNP07585 359 aaKnown RBP15.31■□□□□ 0.04
NUP54-213ENST00000513352 CHRNB1P11230 501 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 GLDCP23378 1020 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 CXCR5P32302 372 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 WASP42768 502 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 PAPOLAP51003 745 aaKnown RBP15.31■□□□□ 0.04
NUP54-213ENST00000513352 PLK1P53350 603 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 ECT2LQ008S8 904 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 SULT2A1Q06520 285 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 CCINQ13939 588 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 PAFAH1B3Q15102 231 aaKnown RBP15.31■□□□□ 0.04
NUP54-213ENST00000513352 DCAF12L1Q5VU92 463 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 NPNTQ6UXI9 565 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 LINGO4Q6UY18 593 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 LEKR1Q6ZMV7 388 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 Q6ZS52 159 aa15.31■□□□□ 0.04
NUP54-213ENST00000513352 CCDC105Q8IYK2 499 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms