RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 ZNF212Q9UDV6 495 aa5.34□□□□□ -1.55
LINC01088-205ENST00000509088 CIDEBQ9UHD4 219 aa5.34□□□□□ -1.55
LINC01088-205ENST00000509088 MAN2B2Q9Y2E5 1009 aa5.34□□□□□ -1.55
LINC01088-205ENST00000509088 CAPN7Q9Y6W3 813 aa5.34□□□□□ -1.55
LINC01088-205ENST00000509088 TRPM1Q7Z4N2 1603 aa5.34□□□□□ -1.56
LINC01088-205ENST00000509088 GOLGA6L10A0A0M3HER8 536 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 LOC102723971A0A1B0GUV8 181 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 BECN2A8MW95 431 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 GOLGA8KD6RF30 607 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 H3BNC9 293 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 AREL1O15033 823 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 EIF3HO15372 352 aaKnown RBP eCLIP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 AP5Z1O43299 807 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 CREB3O43889 395 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 NDST3O95803 873 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 VIMP08670 466 aaKnown RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 SNHG28P0DPA3 235 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 PRF1P14222 555 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 KCNA3P22001 575 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 ACVR2AP27037 513 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 TRAPPC10P48553 1259 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 DGKEP52429 567 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 ITGA8P53708 1063 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 ACTN3Q08043 901 aaPredicted RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 PKP1Q13835 747 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 POSTNQ15063 836 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 STX1AQ16623 288 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 KBTBD12Q3ZCT8 623 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 CERKLQ49MI3 558 aaPredicted RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 CCDC92Q53HC0 331 aaPredicted RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 TTC22Q5TAA0 569 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 ERAP2Q6P179 960 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 SHC4Q6S5L8 630 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 CWC27Q6UX04 472 aaKnown RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 OTUD6AQ7L8S5 288 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 MYLK4Q86YV6 388 aaPredicted RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 ABRAQ8N0Z2 381 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 ARHGAP18Q8N392 663 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 AFAP1Q8N556 730 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 C1orf131Q8NDD1 294 aaKnown RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 B4GALNT2Q8NHY0 566 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 BPIFB1Q8TDL5 484 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 SMCR8Q8TEV9 937 aaPredicted RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 PPP2R3CQ969Q6 453 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 THOC1Q96FV9 657 aaKnown RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 MOGAT1Q96PD6 335 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 RUFY1Q96T51 708 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 EFHD1Q9BUP0 239 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 CLSTN2Q9H4D0 955 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 RABEP2Q9H5N1 569 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 DKK4Q9UBT3 224 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 DDX25Q9UHL0 483 aaKnown RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 TMCO1Q9UM00 188 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 SHOC2Q9UQ13 582 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 RIPOR2Q9Y4F9 1068 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 CDC42BPAQ5VT25 1732 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 ADGBQ8N7X0 1667 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 LAMC3Q9Y6N6 1575 aa5.33□□□□□ -1.56
LINC01088-205ENST00000509088 CDK13Q14004 1512 aaKnown RBP5.33□□□□□ -1.56
LINC01088-205ENST00000509088 MED14O60244 1454 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 ADGRL2O95490 1459 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 GRIN2BQ13224 1484 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 ABCC10Q5T3U5 1492 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 FANCD2Q9BXW9 1451 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 YTHDC2Q9H6S0 1430 aaKnown RBP5.32□□□□□ -1.56
LINC01088-205ENST00000509088 FER1L4A9Z1Z3 1794 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 MSH6P52701 1360 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 PIK3R4Q99570 1358 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 KAT6BQ8WYB5 2073 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 CCDC187A0A096LP49 1063 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 TARSL2A2RTX5 802 aaKnown RBP5.32□□□□□ -1.56
LINC01088-205ENST00000509088 CLCA1A8K7I4 914 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 B4DLN1 442 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 F5H423 210 aaPredicted RBP5.32□□□□□ -1.56
LINC01088-205ENST00000509088 H3BQF6 201 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 AP4M1O00189 453 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 THAP12O43422 761 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 STX6O43752 255 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 MGRN1O60291 552 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 DESP17661 470 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 EEF1GP26641 437 aaKnown RBP5.32□□□□□ -1.56
LINC01088-205ENST00000509088 CCKARP32238 428 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 HSPA4P34932 840 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 PTDSS1P48651 473 aaKnown RBP5.32□□□□□ -1.56
LINC01088-205ENST00000509088 MRPS25P82663 173 aaKnown RBP5.32□□□□□ -1.56
LINC01088-205ENST00000509088 KRT17Q04695 432 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 ARHGEF7Q14155 803 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 SLC29A2Q14542 456 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 KCNAB1Q14722 419 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 CASP8Q14790 479 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 RBMS2Q15434 407 aaKnown RBP5.32□□□□□ -1.56
LINC01088-205ENST00000509088 FAM187BQ17R55 369 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 WHAMMP3Q1A5X7 153 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 CMPK2Q5EBM0 449 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 C10orf25Q5T742 122 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 WDR78Q5VTH9 848 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 PLAG1Q6DJT9 500 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 CCDC70Q6NSX1 233 aa5.32□□□□□ -1.56
LINC01088-205ENST00000509088 CAND1Q86VP6 1230 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms