RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 HADHQ16836 314 aaKnown RBP13.89□□□□□ -0.19
COL1A1-208ENST00000494334 ATP13A4Q4VNC1 1196 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 PPP6R3Q5H9R7 873 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-208ENST00000494334 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 WDR5BQ86VZ2 330 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 ZNF366Q8N895 744 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 RTL3Q8N8U3 475 aaKnown RBP13.89□□□□□ -0.19
COL1A1-208ENST00000494334 KDM1BQ8NB78 822 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 MDGA1Q8NFP4 955 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 TEKT4Q8WW24 435 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 ATRIPQ8WXE1 791 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 HSPH1Q92598 858 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 CATSPERBQ9H7T0 1116 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 PCDHGA2Q9Y5H1 932 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 WDFY4Q6ZS81 3184 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 A0A0A6YYK5 440 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 AXIN1O15169 862 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 FGF10O15520 208 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 SYNCRIPO60506 623 aaKnown RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 SNAP91O60641 907 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 LILRB5O75023 590 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 IPO7O95373 1038 aaKnown RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 GABRG2P18507 467 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 NBL1P41271 181 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 NOP2P46087 812 aaKnown RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 HCAR3P49019 387 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 ZNF135P52742 658 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 HADHBP55084 474 aaKnown RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 KRT83P78385 493 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 NHLH1Q02575 133 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 STARD3Q14849 445 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 RFX8Q6ZV50 586 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 POLNQ7Z5Q5 900 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 DCAF4L2Q8NA75 395 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 HMGB4Q8WW32 186 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 SPON2Q9BUD6 331 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 C2orf49Q9BVC5 232 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 TPSD1Q9BZJ3 242 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 MAGEH1Q9H213 219 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 MTG2Q9H4K7 406 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 NOL6Q9H6R4 1146 aaKnown RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 ATP13A1Q9HD20 1204 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 CWC15Q9P013 229 aaKnown RBP13.88□□□□□ -0.19
COL1A1-208ENST00000494334 SUN2Q9UH99 717 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 VPS51Q9UID3 782 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 SALL4Q9UJQ4 1053 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 USP34Q70CQ2 3546 aa13.88□□□□□ -0.19
COL1A1-208ENST00000494334 CACNA1HO95180 2353 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 TTC34A8MYJ7 566 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 DAPK3O43293 454 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 HRO43593 1189 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 RAMP2O60895 175 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 ZMPSTE24O75844 475 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 MT-CO1P00395 513 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 ERCC2P18074 760 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 GLDCP23378 1020 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 ACVRL1P37023 503 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 NNMTP40261 264 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 MRE11P49959 708 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 VAV2P52735 878 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 COPAP53621 1224 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 POLD3Q15054 466 aaPredicted RBP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 HNRNPA1L2Q32P51 320 aaKnown RBP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 IL31Q6EBC2 164 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 ZC3H14Q6PJT7 736 aaKnown RBP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 LRRC8AQ8IWT6 810 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 UMODL1-AS1Q8N2C9 162 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 PGBD3Q8N328 593 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 FAM71BQ8TC56 605 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 ARHGEF2Q92974 986 aaKnown RBP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 PHOX2BQ99453 314 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 ACE2Q9BYF1 805 aaPredicted RBP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 LACRTQ9GZZ8 138 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 MKRN2Q9H000 416 aaKnown RBP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 SLC6A17Q9H1V8 727 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 PCDH18Q9HCL0 1135 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 PRSS16Q9NQE7 514 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 BCCIPQ9P287 314 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL1A1-208ENST00000494334 SLC25A13Q9UJS0 675 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 DUSP10Q9Y6W6 482 aa13.87□□□□□ -0.19
COL1A1-208ENST00000494334 MUC6Q6W4X9 2439 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 CBX4O00257 560 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 PJA2O43164 708 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 ATP9BO43861 1147 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 KRT7P08729 469 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 CD48P09326 243 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 NDUFV2P19404 249 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 IL4RP24394 825 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 CNR2P34972 360 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 GJC1P36383 396 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 ETFBP38117 255 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 ARL4AP40617 200 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 SLC1A1P43005 524 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 ARSEP51690 589 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 CDH6P55285 790 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 YBEYP58557 167 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-208ENST00000494334 ARF5P84085 180 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms