RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 UTP6Q9NYH9 597 aaKnown RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 SNX10Q9Y5X0 201 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ADGRA2Q96PE1 1338 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 TNRC6CQ9HCJ0 1690 aaKnown RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ARL5CA6NH57 179 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 CABYRO75952 493 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 FGFR1P11362 822 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 SP100P23497 879 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 PBX3P40426 434 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 GPD2P43304 727 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 PPIDQ08752 370 aaKnown RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 CWF19L1Q69YN2 538 aaKnown RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 FAM81AQ8TBF8 368 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 PCED1BQ96HM7 432 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 PRPF18Q99633 342 aaKnown RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF670Q9BS34 389 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ATP13A1Q9HD20 1204 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 SIX4Q9UIU6 781 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 A0A1W2PPM1 405 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 PHGDHO43175 533 aaKnown RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 AOC2O75106 756 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 PIRTP0C851 137 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 POLD3Q15054 466 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 TEDDM1Q5T9Z0 273 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ANKRD22Q5VYY1 191 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF470Q6ECI4 717 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ELMSAN1Q6PJG2 1045 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ANGPTL8Q6UXH0 198 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 KCNMB4Q86W47 210 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 CCNJLQ8IV13 435 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 CCDC185Q8N715 623 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 PLD5Q8N7P1 536 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF483Q8TF39 744 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-218ENST00000482171 EXOC2Q96KP1 924 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 CSPG4P5Q96PW8 444 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 LRMDAQ9H2I8 198 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 SLC12A4Q9UP95 1085 aa11.52□□□□□ -0.57
SMPD4-218ENST00000482171 DDX60Q8IY21 1712 aaKnown RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 A8MX80 341 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 EDF1O60869 148 aaKnown RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 PROCP04070 461 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 STMN1P16949 149 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 PTPN7P35236 360 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 GRIK3Q13003 919 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 CA9Q16790 459 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 EML3Q32P44 896 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF618Q5T7W0 954 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 CTU1Q7Z7A3 348 aaKnown RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 CYGBQ8WWM9 190 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 TSPAN17Q96FV3 270 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 P2RY11Q96G91 374 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 TRAPPC9Q96Q05 1148 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 GRIP2Q9C0E4 1043 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 SDCBP2Q9H190 292 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 LRRC4CQ9HCJ2 640 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 STX18Q9P2W9 335 aaKnown RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 PACSIN3Q9UKS6 424 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 CA12O43570 354 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 TIMM44O43615 452 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 MGEA5O60502 916 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF189O75820 626 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 IL1R2P27930 398 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 ADRA1BP35368 520 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 DUSP4Q13115 394 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 C16orf89Q6UX73 402 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF786Q8N393 782 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 EZH1Q92800 747 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 ERLEC1Q96DZ1 483 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 RHOBTB2Q9BYZ6 727 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 C12orf65Q9H3J6 166 aaKnown RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 CNGB3Q9NQW8 809 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 PSMC3P17980 439 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 GRK4P32298 578 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 GP5P40197 560 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 RENBPP51606 427 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 PLK1P53350 603 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 RHOAP61586 193 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 OGDHQ02218 1023 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 TBL3Q12788 808 aaKnown RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 C16orf72Q14CZ0 275 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 SLC25A52Q3SY17 297 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 MAB21L3Q8N8X9 362 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 CATSPER2Q96P56 530 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 MRPL40Q9NQ50 206 aaKnown RBP11.51□□□□□ -0.57
SMPD4-218ENST00000482171 ACOT9Q9Y305 439 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 DERAQ9Y315 318 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 ACTL7BQ9Y614 415 aa11.51□□□□□ -0.57
SMPD4-218ENST00000482171 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 SYCE1LA8MT33 242 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 LIN7AO14910 233 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-218ENST00000482171 PMM2O15305 246 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 ASMTLO95671 621 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 RALBP11234 206 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 CPA3P15088 417 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 NFKBIAP25963 317 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 PTGIRP43119 386 aa11.5□□□□□ -0.57
SMPD4-218ENST00000482171 EPHB3P54753 998 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms