RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 TBC1D3GQ6DHY5 549 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 TBC1D3CQ6IPX1 549 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 USP53Q70EK8 1073 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 INTS8Q75QN2 995 aaKnown RBP12.73□□□□□ -0.37
SBF1-208ENST00000477234 ADIPOR2Q86V24 386 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 FAM186BQ8IYM0 893 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 TBC1D3Q8IZP1 549 aaPredicted RBP12.73□□□□□ -0.37
SBF1-208ENST00000477234 ZSCAN1Q8NBB4 408 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 OR14C36Q8NHC7 312 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 CYFIP2Q96F07 1278 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 TRIM5Q9C035 493 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 TRIM4Q9C037 500 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 NMUR1Q9HB89 426 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 ARMCX3Q9UH62 379 aaPredicted RBP12.73□□□□□ -0.37
SBF1-208ENST00000477234 LIMA1Q9UHB6 759 aaKnown RBP12.73□□□□□ -0.37
SBF1-208ENST00000477234 NUDT5Q9UKK9 219 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 HBS1LQ9Y450 684 aaKnown RBP12.73□□□□□ -0.37
SBF1-208ENST00000477234 USP3Q9Y6I4 520 aa12.73□□□□□ -0.37
SBF1-208ENST00000477234 EDDM13A0A1B0GTR0 161 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 SLC12A8A0AV02 714 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 LRRC10BA6NIK2 292 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 PRAMEF26H0Y7S4 382 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 STX10O60499 249 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 PPFIA2O75334 1257 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 TCEA3O75764 348 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 MOCS3O95396 460 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 ADORA2BP29275 332 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 SLC8A1P32418 973 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 NNMTP40261 264 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 FANCCQ00597 558 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 NCOA4Q13772 614 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 MAN2A1Q16706 1144 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 ISXQ2M1V0 245 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 SETMARQ53H47 684 aaPredicted RBP12.72□□□□□ -0.37
SBF1-208ENST00000477234 DSG4Q86SJ6 1040 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 CREBRFQ8IUR6 639 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 ZNF366Q8N895 744 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 MAPK15Q8TD08 544 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 IFT43Q96FT9 208 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 TUBGCP2Q9BSJ2 902 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 NT5C1AQ9BXI3 368 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 UBXN6Q9BZV1 441 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 IMPG2Q9BZV3 1241 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 NLGN3Q9NZ94 848 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 STOML2Q9UJZ1 356 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 ATXN7L1Q9ULK2 861 aaPredicted RBP12.72□□□□□ -0.37
SBF1-208ENST00000477234 CLEC4EQ9ULY5 219 aa12.72□□□□□ -0.37
SBF1-208ENST00000477234 SPTBN1Q01082 2364 aaKnown RBP12.71□□□□□ -0.37
SBF1-208ENST00000477234 HHLA1C9JL84 531 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 MID1O15344 667 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 SRPRAP08240 638 aaKnown RBP12.71□□□□□ -0.37
SBF1-208ENST00000477234 NDST1P52848 882 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 ADPRHP54922 357 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 UBASH3AP57075 661 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 TRIP4Q15650 581 aaPredicted RBP12.71□□□□□ -0.37
SBF1-208ENST00000477234 C3orf38Q5JPI3 329 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.37
SBF1-208ENST00000477234 MMAAQ8IVH4 418 aaKnown RBP12.71□□□□□ -0.37
SBF1-208ENST00000477234 TTC39CQ8N584 583 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 WDR36Q8NI36 951 aaKnown RBP12.71□□□□□ -0.37
SBF1-208ENST00000477234 TTC17Q96AE7 1141 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 SGF29Q96ES7 293 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 DDX50Q9BQ39 737 aaKnown RBP12.71□□□□□ -0.37
SBF1-208ENST00000477234 DUSP16Q9BY84 665 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 HSD3B7Q9H2F3 369 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 EBF2Q9HAK2 575 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 FAM49BQ9NUQ9 324 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 KLHL11Q9NVR0 708 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 SEPT10Q9P0V9 454 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 SATB2Q9UPW6 733 aa12.71□□□□□ -0.37
SBF1-208ENST00000477234 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.71□□□□□ -0.37
SBF1-208ENST00000477234 TDRD6O60522 2096 aaKnown RBP12.7□□□□□ -0.38
SBF1-208ENST00000477234 CDRT15L2A8MXV6 281 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 GOLGA6L6A8MZA4 724 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 TMX2-CTNND1H3BSU7 103 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 PES1O00541 588 aaKnown RBP12.7□□□□□ -0.38
SBF1-208ENST00000477234 TRIM38O00635 465 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 ITGA2BP08514 1039 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 DGKAP23743 735 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
SBF1-208ENST00000477234 CETN1Q12798 172 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
SBF1-208ENST00000477234 ELAVL3Q14576 367 aaKnown RBP12.7□□□□□ -0.38
SBF1-208ENST00000477234 KRT31Q15323 416 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 C4orf17Q53FE4 359 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 FAM46CQ5VWP2 391 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 SCARA5Q6ZMJ2 495 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 RBM44Q6ZP01 1051 aaKnown RBP12.7□□□□□ -0.38
SBF1-208ENST00000477234 GPRIN1Q7Z2K8 1008 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 SCD5Q86SK9 330 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 CLEC14AQ86T13 490 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 TRIM69Q86WT6 500 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 DCP2Q8IU60 420 aaKnown RBP12.7□□□□□ -0.38
SBF1-208ENST00000477234 IRF2BP1Q8IU81 584 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 UNC45BQ8IWX7 931 aa12.7□□□□□ -0.38
SBF1-208ENST00000477234 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms