RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PCDH18Q9HCL0 1135 aa15.34■□□□□ 0.05
CDC42SE1-203ENST00000470278 RBM12Q9NTZ6 932 aaKnown RBP15.34■□□□□ 0.05
CDC42SE1-203ENST00000470278 CWC15Q9P013 229 aaKnown RBP15.34■□□□□ 0.05
CDC42SE1-203ENST00000470278 INTS6Q9UL03 887 aaKnown RBP15.34■□□□□ 0.05
CDC42SE1-203ENST00000470278 OR51B4Q9Y5P0 310 aa15.34■□□□□ 0.05
CDC42SE1-203ENST00000470278 USP24Q9UPU5 2620 aa15.33■□□□□ 0.05
CDC42SE1-203ENST00000470278 CXorf51AA0A1B0GTR3 108 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 MOCS3O95396 460 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 RHOCP08134 193 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 TDGF1P13385 188 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 HNRNPLP14866 589 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 ETFBP38117 255 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 CSKP41240 450 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 CDH6P55285 790 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 PITRM1Q5JRX3 1037 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 Q6ZS52 159 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 TRMT11Q7Z4G4 463 aaKnown RBP15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 KIAA2013Q8IYS2 634 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 UMODL1-AS1Q8N2C9 162 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 OR52K2Q8NGK3 314 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 KIAA1524Q8TCG1 905 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 USP33Q8TEY7 942 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 UCMAQ8WVF2 138 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 TTC17Q96AE7 1141 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 FAF2Q96CS3 445 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 ALG14Q96F25 216 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 CSPG4P5Q96PW8 444 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 FEM1AQ9BSK4 669 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 GOLPH3Q9H4A6 298 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 ELOVL2Q9NXB9 296 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 DDX56Q9NY93 547 aaKnown RBP15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 CAPN6Q9Y6Q1 641 aa15.33■□□□□ 0.04
CDC42SE1-203ENST00000470278 ASLP04424 464 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 CTNNA1P35221 906 aaKnown RBP15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 GNA12Q03113 381 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 SULT2A1Q06520 285 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 ENPP2Q13822 863 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 DPYSL3Q14195 570 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 KRT81Q14533 505 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 MBLAC2Q68D91 279 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 MAP7D3Q8IWC1 876 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 KATNAL2Q8IYT4 538 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 SPEM1Q8N4L4 309 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZNF513Q8N8E2 541 aaPredicted RBP15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 DCAF4L2Q8NA75 395 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 KDM1BQ8NB78 822 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 ACDQ96AP0 544 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 NDFIP2Q9NV92 336 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 HCN2Q9UL51 889 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 HYOU1Q9Y4L1 999 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 EML5Q05BV3 1969 aa15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 CNOT1A5YKK6 2376 aaKnown RBP15.32■□□□□ 0.04
CDC42SE1-203ENST00000470278 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 DCLK1O15075 740 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZSCAN12O43309 604 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 RAMP2O60895 175 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 ATG13O75143 517 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 PALMO75781 387 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 PAPSS2O95340 614 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 ATP5BP06576 529 aaKnown RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 CD48P09326 243 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 DLDP09622 509 aaKnown RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 ERCC2P18074 760 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 POLR2EP19388 210 aaKnown RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 KDELR1P24390 212 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 IL4RP24394 825 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 CTNNA2P26232 953 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 MZF1P28698 734 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 GJC1P36383 396 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 YBEYP58557 167 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 GAS6Q14393 721 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 PARP15Q460N3 678 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 ATP13A4Q4VNC1 1196 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 RNF219Q5W0B1 726 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 EGFLAMQ63HQ2 1017 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 NT5DC3Q86UY8 548 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 APCDD1Q8J025 514 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 IL17RCQ8NAC3 791 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 KCTD6Q8NC69 237 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZBTB44Q8NCP5 570 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 RPLP0P6Q8NHW5 317 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZNF830Q96NB3 372 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 C2orf49Q9BVC5 232 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 CIPCQ9C0C6 399 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 MUC3BQ9H195 1237 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 MAGEH1Q9H213 219 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 PRMT8Q9NR22 394 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 DLL3Q9NYJ7 618 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 THAP10Q9P2Z0 257 aaPredicted RBP15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 DNAI1Q9UI46 699 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 VPS28Q9UK41 221 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 GUCA1BQ9UMX6 200 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 LAMA1P25391 3075 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 RALGAPA1Q6GYQ0 2036 aa15.31■□□□□ 0.04
CDC42SE1-203ENST00000470278 SPAG17Q6Q759 2223 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms