RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ALDH16A1Q8IZ83 802 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 DENND6BQ8NEG7 585 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 OR9A1PQ8NGU1 263 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 AUTS2Q8WXX7 1259 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 DTNBP1Q96EV8 351 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 CDCA5Q96FF9 252 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 SMC6Q96SB8 1091 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 NUP85Q9BW27 656 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 PRDM13Q9H4Q3 707 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 SUV39H2Q9H5I1 410 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 KCNH7Q9NS40 1196 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 SLC35D1Q9NTN3 355 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 ASTN1O14525 1302 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 IGSF9BQ9UPX0 1349 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 TTC26A0AVF1 554 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 ACOD1A6NK06 481 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 NFIBO00712 420 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 PHACTR2O75167 634 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 SEC24DO94855 1032 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 CSF1P09603 554 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 LUMP51884 338 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 SNAP25P60880 206 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 MRPS15P82914 257 aaKnown RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 ITGB3BPQ13352 177 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 PPIL2Q13356 520 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 RBBP5Q15291 538 aaKnown RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 AAK1Q2M2I8 961 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 ASTE1Q2TB18 679 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 SGO2Q562F6 1265 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 RNF207Q6ZRF8 634 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 TSPYL5Q86VY4 417 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 SCUBE1Q8IWY4 988 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 C1orf127Q8N9H9 656 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 C3orf20Q8ND61 904 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 POC1BQ8TC44 478 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 ATP6V0A1Q93050 837 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 MVB12AQ96EY5 273 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 DYDC2Q96IM9 177 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 PLIN2Q99541 437 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 APOL6Q9BWW8 343 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 BBS2Q9BXC9 721 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 STN1Q9H668 368 aaKnown RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 HAUS4Q9H6D7 363 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 UBA2Q9UBT2 640 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 ANAPC5Q9UJX4 755 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 ZMYND8Q9ULU4 1186 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-208ENST00000453705 NENFQ9UMX5 172 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 TMEM5Q9Y2B1 443 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 PSAT1Q9Y617 370 aa8.01□□□□□ -1.13
BRCC3-208ENST00000453705 IGKV6D-21A0A0A0MT36 114 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 TTLL8A6PVC2 850 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 SPATA31C2B4DYI2 1134 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 NDUFAB1O14561 156 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 APOL1O14791 398 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 MGEA5O60502 916 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 STBD1O95210 358 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 ALDH1A1P00352 501 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 ITGAVP06756 1048 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 ANXA6P08133 673 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 CCNYL3P0C7X3 344 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 ACAT1P24752 427 aaKnown RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 ARHGAP25P42331 645 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 ABCG1P45844 678 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 NCKAP1LP55160 1127 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 RPS6P62753 249 aaKnown RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 TBC1D8BQ0IIM8 1120 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 ELP6Q0PNE2 266 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 NNTQ13423 1086 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 SLC12A1Q13621 1099 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 TCTE1Q5JU00 501 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 PRAMEF18Q5VWM3 479 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 PEAR1Q5VY43 1037 aaPredicted RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 EHBP1Q8NDI1 1231 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 TTC16Q8NEE8 873 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 SHCBP1Q8NEM2 672 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 CYP2W1Q8TAV3 490 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 AFG1LQ8WV93 481 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 SGK3Q96BR1 496 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 GPR63Q9BZJ6 419 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 GANQ9H2C0 597 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 RNF146Q9NTX7 359 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 CACNG4Q9UBN1 327 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 CAMK2AQ9UQM7 478 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 CLCA3PQ9Y6N3 262 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 A0A087WUV0 522 aaPredicted RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 GOLGA8MH3BSY2 632 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 NOL3O60936 208 aaKnown RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 ATP2A2P16615 1042 aaKnown RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 CYLC1P35663 651 aaPredicted RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 GGT5P36269 586 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 BUD31P41223 144 aaPredicted RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 QARSP47897 775 aaKnown RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 EPHB4P54760 987 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 ADKP55263 362 aaKnown RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 PSMC5P62195 406 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 DR1Q01658 176 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 OTUD4Q01804 1114 aaKnown RBP8□□□□□ -1.13
BRCC3-208ENST00000453705 SPP2Q13103 211 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 RCN2Q14257 317 aa8□□□□□ -1.13
BRCC3-208ENST00000453705 SLC39A12Q504Y0 691 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms