RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 LRIG2O94898 1065 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 ZRANB2O95218 330 aaKnown RBP eCLIP9.43□□□□□ -0.91e-6■■■■■ 42
RFX3-207ENST00000449190 LUC7L3O95232 432 aaKnown RBP9.43□□□□□ -0.9
RFX3-207ENST00000449190 KRT1P04264 644 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 RHOCP08134 193 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 TCF4P15884 667 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 KDELR1P24390 212 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 OR1E1P30953 314 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 SEC13P55735 322 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 TAS2R40P59535 323 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 DMWDQ09019 674 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 MESP2Q0VG99 397 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 SLC12A1Q13621 1099 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 DPYSL2Q16555 572 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 CA9Q16790 459 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 C5orf22Q49AR2 442 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 C2orf27AQ580R0 203 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 C6orf118Q5T5N4 469 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 FAM72AQ5TYM5 149 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 EMC10Q5UCC4 262 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 FAM72DQ6L9T8 149 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 FAM72BQ86X60 149 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 RCOR2Q8IZ40 523 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 CCAR2Q8N163 923 aaKnown RBP9.43□□□□□ -0.9
RFX3-207ENST00000449190 FIBINQ8TAL6 211 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 WFIKKN2Q8TEU8 576 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 RBM41Q96IZ5 413 aaKnown RBP9.43□□□□□ -0.9
RFX3-207ENST00000449190 PRICKLE1Q96MT3 831 aaPredicted RBP9.43□□□□□ -0.9
RFX3-207ENST00000449190 PCDH18Q9HCL0 1135 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 MPP6Q9NZW5 540 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 RCOR3Q9P2K3 495 aaPredicted RBP9.43□□□□□ -0.9
RFX3-207ENST00000449190 EBF1Q9UH73 591 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 MMP17Q9ULZ9 603 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 PCDHA3Q9Y5H8 950 aa9.43□□□□□ -0.9
RFX3-207ENST00000449190 IGLV3-10A0A075B6K4 115 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 LRRD1A4D1F6 860 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 I6L893 689 aaPredicted RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 AXIN1O15169 862 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 CNTN5O94779 1100 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 APBB3O95704 486 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 FTCDO95954 541 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 ZFXP17010 805 aaPredicted RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 GOT1P17174 413 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 POLR2EP19388 210 aaKnown RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 CTNNA2P26232 953 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 HOXD9P28356 352 aaPredicted RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 ETFBP38117 255 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 MAPKAPK2P49137 400 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 SGSHP51688 502 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 DGKEP52429 567 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 RWDD2BP57060 319 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 KDSRQ06136 332 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 SIM2Q14190 667 aaPredicted RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 RPS6KA1Q15418 735 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 CRY1Q16526 586 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 ATP13A4Q4VNC1 1196 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 ZNF569Q5MCW4 686 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 EOGTQ5NDL2 527 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 HEATR6Q6AI08 1181 aaKnown RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 TXNRD3NBQ6F5E7 133 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 RFX8Q6ZV50 586 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 TRMT11Q7Z4G4 463 aaKnown RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 ANKS1BQ7Z6G8 1248 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 TFAP2DQ7Z6R9 452 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 SETD3Q86TU7 594 aaPredicted RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 NT5DC3Q86UY8 548 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 CIR1Q86X95 450 aaPredicted RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 ZNF354CQ86Y25 554 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 CPNE8Q86YQ8 564 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 CCDC50Q8IVM0 306 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 REXO1L1PQ8IX06 675 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 KATNAL2Q8IYT4 538 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 ZNF683Q8IZ20 524 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 CCDC33Q8N5R6 958 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 LZTR1Q8N653 840 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 LRRC57Q8N9N7 239 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 TERB1Q8NA31 727 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 IL17RCQ8NAC3 791 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 EXD1Q8NHP7 514 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 UCMAQ8WVF2 138 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 RUBCNQ92622 972 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 MYEOVQ96EZ4 313 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 MAGEB5Q9BZ81 275 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 MUC3BQ9H195 1237 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 GOLPH3Q9H4A6 298 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 PRDM16Q9HAZ2 1276 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 ABCB8Q9NUT2 735 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 TMEM248Q9NWD8 314 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 CWC15Q9P013 229 aaKnown RBP9.42□□□□□ -0.9
RFX3-207ENST00000449190 RAB23Q9ULC3 237 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 HPCAL4Q9UM19 191 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 SLC27A6Q9Y2P4 619 aa9.42□□□□□ -0.9
RFX3-207ENST00000449190 ILVBLA1L0T0 632 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 ANTXRLA6NF34 631 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 WASH4PA8MWX3 477 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 TRIM24O15164 1050 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 RAMP2O60895 175 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 ALDH1A2O94788 518 aa9.41□□□□□ -0.9
RFX3-207ENST00000449190 KLF8O95600 359 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms