RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SFPQP23246 707 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 HOXD12P35452 270 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 STAT6P42226 847 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 GDF5P43026 501 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 VPS41P49754 854 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 INHBCP55103 352 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 TMF1P82094 1093 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ZXDAP98168 799 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 DPTQ07507 201 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 MAPK7Q13164 816 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 FHL2Q14192 279 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 RABEP1Q15276 862 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 LRRC24Q50LG9 513 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 GLE1Q53GS7 698 aaKnown RBP4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ATG16L1Q676U5 607 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 CASC1Q6TDU7 716 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 DBX2Q6ZNG2 339 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 GGNQ86UU5 652 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 GALNT4Q8N4A0 578 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ANKRD44Q8N8A2 993 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ENDOVQ8N8Q3 282 aaKnown RBP4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ANKRD7Q92527 254 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 SARAFQ96BY9 339 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 RBM17Q96I25 401 aaKnown RBP4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 SEC62Q99442 399 aaKnown RBP4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 SENP7Q9BQF6 1050 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 GPR63Q9BZJ6 419 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ARHGAP39Q9C0H5 1083 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 KLK15Q9H2R5 256 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 PANK3Q9H999 370 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 SFXN1Q9H9B4 322 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 PRDM16Q9HAZ2 1276 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ASNSD1Q9NWL6 643 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ASB6Q9NWX5 421 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 B3GNT3Q9Y2A9 372 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 WNT6Q9Y6F9 365 aa4.84□□□□□ -1.63
HMGB1P16-201ENST00000447155 ANKRD26Q9UPS8 1709 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 KIAA0556O60303 1618 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 SYNJ2O15056 1496 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 ABCC5O15440 1437 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 SPATA31A5Q5VU36 1347 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 SPATA31A6Q5VVP1 1343 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 SPATA31A7Q8IWB4 1347 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 SMTNL1A8MU46 457 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 PRRT4C9JH25 899 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 CHRM5P08912 532 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 ACP5P13686 325 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 CPA1P15085 419 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 SLC37A1P57057 533 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 TPM4P67936 248 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 THOC5Q13769 683 aaKnown RBP4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 GPR162Q16538 588 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 WDR45BQ5MNZ6 344 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 CBWD5Q5RIA9 395 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 ANO7Q6IWH7 933 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 KIAA1324Q6UXG2 1013 aaKnown RBP4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 AMIGO2Q86SJ2 522 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 MNS1Q8NEH6 495 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZNF397Q8NF99 534 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 LINS1Q8NG48 757 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 HTRA1Q92743 480 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZNF830Q96NB3 372 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 PPP1R10Q96QC0 940 aaKnown RBP4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 HERC2P3Q9BVR0 1158 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 TRIM2Q9C040 744 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 UNC45AQ9H3U1 944 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 UBN1Q9NPG3 1134 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 ARGLU1Q9NWB6 273 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 SERGEFQ9UGK8 458 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 MAFFQ9ULX9 164 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 AFG3L2Q9Y4W6 797 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 INSL6Q9Y581 213 aa4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 HEMK1Q9Y5R4 338 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P16-201ENST00000447155 ADAMTS12P58397 1594 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 PLB1Q6P1J6 1458 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 ANKRD50Q9ULJ7 1429 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 KIF2AO00139 706 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 TULP2O00295 520 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 CYR61O00622 381 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 KLK10O43240 276 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 EPB41L2O43491 1005 aaKnown RBP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZNF84P51523 738 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 CDK18Q07002 472 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 DMWDQ09019 674 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 KLF10Q13118 480 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 G3BP1Q13283 466 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 SLC14A1Q13336 389 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 PFKFB3Q16875 520 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 SLC4A8Q2Y0W8 1093 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 CERKLQ49MI3 558 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZNF362Q5T0B9 420 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 RETSATQ6NUM9 610 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 PCSK4Q6UW60 755 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 GPR150Q8NGU9 434 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 HVCN1Q96D96 273 aa4.82□□□□□ -1.64
HMGB1P16-201ENST00000447155 GPR78Q96P69 363 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms