RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 L1CAMP32004 1257 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PTPN9P43378 593 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ABCE1P61221 599 aaKnown RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 DDR2Q16832 855 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 IMPG1Q17R60 797 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 C6orf89Q6UWU4 347 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SNX32Q86XE0 403 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 IGDCC3Q8IVU1 814 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ZNF567Q8N184 647 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 BANPQ8N9N5 519 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 NCLNQ969V3 563 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 COLEC11Q9BWP8 271 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ADAM7Q9H2U9 754 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PTPRHQ9HD43 1115 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 CHRAC1Q9NRG0 131 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 CD274Q9NZQ7 290 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SUFUQ9UMX1 484 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 C10orf71Q711Q0 1435 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 FAM95CA0A1B0GW59 222 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 GLTPD2A6NH11 291 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ERI2A8K979 691 aaKnown RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 F8W8V4 182 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 CBX4O00257 560 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 AKAP10O43572 662 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 RAMP2O60895 175 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 TCEA3O75764 348 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 RASSF9O75901 435 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PIRTP0C851 137 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ATN1P54259 1190 aaPredicted RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 MRPS35P82673 323 aaKnown RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SLC34A1Q06495 639 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ARHGEF6Q15052 776 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 TRMT5Q32P41 509 aaKnown RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 C6orf10Q5SRN2 563 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 TUBGCP3Q96CW5 907 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PCED1BQ96HM7 432 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ZMAT2Q96NC0 199 aaKnown RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 QKIQ96PU8 341 aaKnown RBP eCLIP8.62□□□□□ -1.035e-7■■■■■ 27.3
PTPRK-206ENST00000368215 RHOBTB2Q9BYZ6 727 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 IL22Q9GZX6 179 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 MAF1Q9H063 256 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 VCX3AQ9NNX9 186 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 CNGB3Q9NQW8 809 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 STX7O15400 261 aaKnown RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SRP72O76094 671 aaKnown RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 IQCF3P0C7M6 154 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PTDSS1P48651 473 aaKnown RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 MRNIPQ6NTE8 343 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 NEPROQ6NW34 567 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 LRRC74BQ6ZQY2 392 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 CLPTM1LQ96KA5 538 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 GPR63Q9BZJ6 419 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ZNF395Q9H8N7 513 aaPredicted RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 LATS2Q9NRM7 1088 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SMPD4Q9NXE4 827 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ADAMTS5Q9UNA0 930 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 TRPC5OSA6NMA1 111 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ZBBXA8MT70 800 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 TSPAN8P19075 237 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 EDNRBP24530 442 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 RENBPP51606 427 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PKNOX1P55347 436 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 DSG1Q02413 1049 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 OLIG2Q13516 323 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 AGKQ53H12 422 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SGO1Q5FBB7 561 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ZNF280DQ6N043 979 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 BNC2Q6ZN30 1099 aaPredicted RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ARHGAP18Q8N392 663 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SPATA22Q8NHS9 363 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ZNF398Q8TD17 642 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SOCS4Q8WXH5 440 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 FCRL2Q96LA5 508 aaPredicted RBP8.62□□□□□ -1.03
PTPRK-206ENST00000368215 SERPINB11Q96P15 392 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 VAT1Q99536 393 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ZBTB18Q99592 522 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 ZBED2Q9BTP6 218 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 APOL5Q9BWW9 433 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 TXLNGYQ9BZA5 131 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PHACTR1Q9C0D0 580 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 EPB41L4BQ9H329 900 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 EFCAB1Q9HAE3 211 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PLA2G4CQ9UP65 541 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 KCNH4Q9UQ05 1017 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 PCDHB5Q9Y5E4 795 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 LTBP4Q8N2S1 1624 aa8.62□□□□□ -1.03
PTPRK-206ENST00000368215 KPNA6O60684 536 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 DNAJC6O75061 913 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 PSMG1O95456 288 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 CD86P42081 329 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 ALDH7A1P49419 539 aaKnown RBP8.61□□□□□ -1.03
PTPRK-206ENST00000368215 RAB27AP51159 221 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 CCDC142Q17RM4 750 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 SPRED3Q2MJR0 410 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 SPDYAQ5MJ70 313 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 VWA5B1Q5TIE3 1220 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 RAP1GAP2Q684P5 730 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 OLFML1Q6UWY5 402 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 HFE2Q6ZVN8 426 aa8.61□□□□□ -1.03
PTPRK-206ENST00000368215 PCSK9Q8NBP7 692 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms