RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 TSPAN1O60635 241 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 CSDE1O75534 798 aaKnown RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 C9P02748 559 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 CYP4B1P13584 511 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ETS1P14921 441 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 BUD31P41223 144 aaPredicted RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 PNPLA4P41247 253 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 COL23A1Q86Y22 540 aaPredicted RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 C8orf59Q8N0T1 100 aaPredicted RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 RERGQ96A58 199 aaPredicted RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 CNPY3Q9BT09 278 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 SPG21Q9NZD8 308 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 TTC34A8MYJ7 566 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 SGPL1O95470 568 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 CCNYL3P0C7X3 344 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 MAGP20916 626 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 PKNOX1P55347 436 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 MSLNQ13421 630 aaPredicted RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 CUL2Q13617 745 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 IL18Q14116 193 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 DHRSXQ8N5I4 330 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 SLCO1B7G3V0H7 640 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ATP6V1G2O95670 118 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 HSD3B1P14060 373 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 S100A3P33764 101 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 WDR93Q6P2C0 686 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ATCAYQ86WG3 371 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF563Q8TA94 476 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ZDHHC6Q9H6R6 413 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 CPDO75976 1380 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ZBTB14O43829 449 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 GIMD1P0DJR0 217 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 TAS2R41P59536 307 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 AMPD2Q01433 879 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 MED22Q15528 200 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 EMC1Q8N766 993 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 SIPA1Q96FS4 1042 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 CST11Q9H112 138 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 PCDHB12Q9Y5F1 795 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 KPNA3O00505 521 aaPredicted RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 RSL1D1O76021 490 aaKnown RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 IGFBP4P22692 258 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 THOP1P52888 689 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 RAP1GAP2Q684P5 730 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 EFCAB3Q8N7B9 438 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF540Q8NDQ6 660 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF518AQ6AHZ1 1483 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ARL5CA6NH57 179 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 CHN2P52757 468 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 NECTIN1Q15223 517 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 TPCN2Q8NHX9 752 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 FKBP6O75344 327 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 TOP3BO95985 862 aaKnown RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 TCF7P36402 384 aaPredicted RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
PTCH1-201ENST00000331920 AP1S3Q96PC3 154 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF224Q9NZL3 707 aa16.65■□□□□ 0.26
PTCH1-201ENST00000331920 BMP7P18075 431 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 RFC5P40937 340 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 SPIBQ01892 262 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 TIMM50Q3ZCQ8 353 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 CRNNQ9UBG3 495 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ZBTB11O95625 1053 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 TFPIP10646 304 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ATF4P18848 351 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ADHFE1Q8IWW8 467 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 RBM22Q9NW64 420 aaKnown RBP eCLIP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ARL15Q9NXU5 204 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 GRIP1Q9Y3R0 1128 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 TPD52L2O43399 206 aaKnown RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ITPKBP27987 946 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 ATXN1P54253 815 aaKnown RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.252e-7■■■■■ 26.8
PTCH1-201ENST00000331920 GRIN3AQ8TCU5 1115 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 GPR182O15218 404 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 UBOX5O94941 541 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 SRGNP10124 158 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 TLX1P31314 330 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 CASP5P51878 434 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 TMC7Q7Z402 723 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 KCNMB4Q86W47 210 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 GPSM1Q86YR5 675 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 GLT1D1Q96MS3 346 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 AIFM2Q9BRQ8 373 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 FRMD8Q9BZ67 464 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 PRMT7Q9NVM4 692 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 FOXN3O00409 490 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 OPLAHO14841 1288 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 CXorf57Q6NSI4 855 aaKnown RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 CRELD1Q96HD1 420 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 KDM5DQ9BY66 1539 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 RGS10O43665 173 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 MRPS22P82650 360 aaKnown RBP16.64■□□□□ 0.25
PTCH1-201ENST00000331920 DGLUCYQ7Z3D6 616 aa16.64■□□□□ 0.25
PTCH1-201ENST00000331920 RELTQ969Z4 430 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms