RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 RPL6Q02878 288 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 CREB5Q02930 508 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 ARID5BQ14865 1188 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 TSR1Q2NL82 804 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 C9orf64Q5T6V5 341 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 FNIP1Q8TF40 1166 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 TBC1D31Q96DN5 1066 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 SPON2Q9BUD6 331 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 SMOC1Q9H4F8 434 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 SEMA4GQ9NTN9 838 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 ABHD10Q9NUJ1 306 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 ZNHIT6Q9NWK9 470 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 USP36Q9P275 1121 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 PCSK1NQ9UHG2 260 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 NENFQ9UMX5 172 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 NEU3Q9UQ49 428 aa18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 MYO18AQ92614 2054 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-201ENST00000254193 EDDM13A0A1B0GTR0 161 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 ILVBLA1L0T0 632 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 MT-CO1P00395 513 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 RHOQP17081 205 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 L1CAMP32004 1257 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 MPLP40238 635 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 NNMTP40261 264 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 SLC36A4Q6YBV0 504 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 NLRP14Q86W24 1093 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 FRS2Q8WU20 508 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 PTPRN2Q92932 1015 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 ARHGEF26Q96DR7 871 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 TOE1Q96GM8 510 aaKnown RBP18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 C2orf49Q9BVC5 232 aaPredicted RBP18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 RSPH9Q9H1X1 276 aaPredicted RBP18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 FBRSQ9HAH7 460 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 NDFIP2Q9NV92 336 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 VPS51Q9UID3 782 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 SLC25A13Q9UJS0 675 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 PCDHGA5Q9Y5G8 931 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 USP34Q70CQ2 3546 aa18.42■□□□□ 0.54
SNRPA1-201ENST00000254193 BCLAF3A2AJT9 711 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 TARSL2A2RTX5 802 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 CREB3O43889 395 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 LRP3O75074 770 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 NDUFS2O75306 463 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 RNF8O76064 485 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 CYP1A2P05177 515 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 GLDCP23378 1020 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 CD6P30203 668 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 MIPP30301 263 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 GALCP54803 685 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 KRT83P78385 493 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 GNA12Q03113 381 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 TBX2Q13207 712 aaPredicted RBP18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 CSRP2Q16527 193 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 CA9Q16790 459 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 ASTE1Q2TB18 679 aaPredicted RBP18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 ACCSLQ4AC99 568 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 DAB2IPQ5VWQ8 1189 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 ZNF776Q68DI1 518 aaPredicted RBP18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 LINGO4Q6UY18 593 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 CYP2U1Q7Z449 544 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 FAM124AQ86V42 546 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 STK40Q8N2I9 435 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 GPR161Q8N6U8 529 aaKnown RBP18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 DCAF4L2Q8NA75 395 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 PEBP4Q96S96 227 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 FAM129BQ96TA1 746 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 CHP1Q99653 195 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 NUP85Q9BW27 656 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 DNAI1Q9UI46 699 aa18.41■□□□□ 0.54
SNRPA1-201ENST00000254193 SDK1Q7Z5N4 2213 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 AKR1B15C9JRZ8 316 aaPredicted RBP18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 K7ERQ8 282 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 CBX4O00257 560 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 ATP9BO43861 1147 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 C7P10643 843 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 EPHB2P29323 1055 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 ACVRL1P37023 503 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 MAPKAPK2P49137 400 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 AIF1P55008 147 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 SEMA3BQ13214 749 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 SF3A2Q15428 464 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 DLG2Q15700 870 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 SLC18A3Q16572 532 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 ZNF783Q6ZMS7 281 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 MMAAQ8IVH4 418 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 SLC41A1Q8IVJ1 513 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 SH2D3CQ8N5H7 860 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 PIGKQ92643 395 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 BTBD6Q96KE9 485 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 EPAS1Q99814 870 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 PACSIN1Q9BY11 444 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 DEF6Q9H4E7 631 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 ATP13A1Q9HD20 1204 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 TMEM248Q9NWD8 314 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 WSB2Q9NYS7 404 aaPredicted RBP18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 AP4E1Q9UPM8 1137 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 HS3ST2Q9Y278 367 aa18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.4■□□□□ 0.54
SNRPA1-201ENST00000254193 SSU72P8A0A1W2PR75 194 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 SMAD6O43541 496 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms