RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 KDM1BQ8NB78 822 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 C9orf43Q8TAL5 461 aaPredicted RBP11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 MIB2Q96AX9 1013 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 IFT43Q96FT9 208 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 FAM129BQ96TA1 746 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 MYOCQ99972 504 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 PNPLA8Q9NP80 782 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 PISDQ9UG56 409 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 KIF3AQ9Y496 699 aa11.41□□□□□ -0.58
PTP4A1-207ENST00000639568 HHLA1C9JL84 531 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 H3BM21 787 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 PLRG1O43660 514 aaKnown RBP11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 STX6O43752 255 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 TBL1XO60907 577 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 VPS4BO75351 444 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 P4HA1P13674 534 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 MZF1P28698 734 aaPredicted RBP11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 AKT2P31751 481 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 CSKP41240 450 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 CASP5P51878 434 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 ELAVL3Q14576 367 aaKnown RBP11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF667Q5HYK9 610 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 MFN1Q8IWA4 741 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 CRYBG2Q8N1P7 616 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF548Q8NEK5 533 aaPredicted RBP11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 OR13H1Q8NG92 308 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 NAT6Q93015 286 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 TTC17Q96AE7 1141 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 MYO19Q96H55 970 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 IL12RB2Q99665 862 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 XYLT2Q9H1B5 865 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 SALL4Q9UJQ4 1053 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 VPS4AQ9UN37 437 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 ICE1Q9Y2F5 2266 aa11.4□□□□□ -0.58
PTP4A1-207ENST00000639568 CRYBG3Q68DQ2 2970 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 MTSS1O43312 755 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 MOCS3O95396 460 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 SRPRAP08240 638 aaKnown RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 HGFP14210 728 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 IDEP14735 1019 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 PRLRP16471 622 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 WT1P19544 449 aaPredicted RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 DRD3P35462 400 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 NNMTP40261 264 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 CD97P48960 835 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 NDST1P52848 882 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 PDX1P52945 283 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 HMGN5P82970 282 aaKnown RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 BIRC3Q13489 604 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 TRIP4Q15650 581 aaPredicted RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 SNRNP35Q16560 246 aaKnown RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 DEFB133Q30KQ1 61 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 PERM1Q5SV97 790 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 MPP7Q5T2T1 576 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 FAM46CQ5VWP2 391 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 ZFAND4Q86XD8 727 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 DCP2Q8IU60 420 aaKnown RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 SRRM1Q8IYB3 904 aaKnown RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 TMEM145Q8NBT3 493 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 MRGPRX3Q96LB0 322 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 CCDC3Q9BQI4 270 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 LLPHQ9BRT6 129 aaKnown RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 OLFML3Q9NRN5 406 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 STIM2Q9P246 746 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 ERVW-1Q9UQF0 538 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 CSNK1G3Q9Y6M4 447 aa11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 SETD2Q9BYW2 2564 aaPredicted RBP11.39□□□□□ -0.59
PTP4A1-207ENST00000639568 A0A087X0B3 334 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 PRAMEF33A0A0G2JMD5 474 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 TYW5A2RUC4 315 aaKnown RBP11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 PRAMEF10O60809 474 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 KRT7P08729 469 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 YWHAGP61981 247 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 ECT2LQ008S8 904 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 DRAP1Q14919 205 aaPredicted RBP11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 MCTP1Q6DN14 999 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 STXBP4Q6ZWJ1 553 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 CENPQQ7L2Z9 268 aaPredicted RBP11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 UNC93AQ86WB7 457 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 TICAM1Q8IUC6 712 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 WFDC5Q8TCV5 224 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 LMX1AQ8TE12 382 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 KLK6Q92876 244 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 CYFIP2Q96F07 1278 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 ZNF768Q9H5H4 540 aaKnown RBP11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 CAAP1Q9H8G2 361 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 PREBQ9HCU5 417 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 IPO11Q9UI26 975 aaKnown RBP11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 STOML2Q9UJZ1 356 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 USP3Q9Y6I4 520 aa11.38□□□□□ -0.59
PTP4A1-207ENST00000639568 OTOGQ6ZRI0 2925 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 A0A1W2PQ27 194 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 A0A1W2PQ64 194 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 A0A1W2PQC6 194 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 TPP1O14773 563 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 AQP9O43315 295 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 LATS1O95835 1130 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 CSF2P04141 144 aa11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 HNRNPA2B1P22626 353 aaKnown RBP11.37□□□□□ -0.59
PTP4A1-207ENST00000639568 NOS2P35228 1153 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms