RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 CIR1Q86X95 450 aaPredicted RBP11.53□□□□□ -0.56
TARDBP-221ENST00000619555 PROSER1Q86XN7 944 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 MARCH9Q86YJ5 346 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 DEFB106AQ8N104 65 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 STK40Q8N2I9 435 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 WDTC1Q8N5D0 677 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 KDM1BQ8NB78 822 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 BTN2A3PQ96KV6 586 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 SLC6A18Q96N87 628 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 CDC6Q99741 560 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 HSD3B7Q9H2F3 369 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 POPDC2Q9HBU9 364 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 SCML1Q9UN30 329 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 CEP83Q9Y592 693 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 ARID1BQ8NFD5 2236 aaPredicted RBP11.53□□□□□ -0.56
TARDBP-221ENST00000619555 BAHCC1Q9P281 2608 aa11.53□□□□□ -0.56
TARDBP-221ENST00000619555 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.56
TARDBP-221ENST00000619555 SYNJ2BP-COX16A0A087WUM0 186 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 EDDM13A0A1B0GTR0 161 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 A0A1W2PPC4 97 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 SYCE3A1L190 88 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 KCNU1A8MYU2 1149 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 F5H5T6 163 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 WNT9AO14904 365 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 RNASEH2AO75792 299 aaKnown RBP11.52□□□□□ -0.57
TARDBP-221ENST00000619555 WNT1P04628 370 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 HOXB3P14651 431 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-221ENST00000619555 VAV1P15498 845 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 PDGFRAP16234 1089 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 MZF1P28698 734 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-221ENST00000619555 PSMD8P48556 350 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 CCT8P50990 548 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 PDCLQ13371 301 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 KCNJ12Q14500 433 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 NFKBIBQ15653 356 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 MEA1Q16626 185 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 TPD52L1Q16890 204 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-221ENST00000619555 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 CDKAL1Q5VV42 579 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 RNF219Q5W0B1 726 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-221ENST00000619555 TRIM65Q6PJ69 517 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 ENOSF1Q7L5Y1 443 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 TMPRSS7Q7RTY8 843 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 AADATQ8N5Z0 425 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 ATP6V0D2Q8N8Y2 350 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-221ENST00000619555 PTPRN2Q92932 1015 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 IGSF8Q969P0 613 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 CPXM1Q96SM3 734 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 PRMT1Q99873 361 aaKnown RBP11.52□□□□□ -0.57
TARDBP-221ENST00000619555 OMDQ99983 421 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 TRIM62Q9BVG3 475 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 FAM204AQ9H8W3 233 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.52□□□□□ -0.57
TARDBP-221ENST00000619555 COX16Q9P0S2 106 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 ITPR1Q14643 2758 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 ITIH6Q6UXX5 1313 aa11.52□□□□□ -0.57
TARDBP-221ENST00000619555 LRRC72A6NJI9 287 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 C10orf142B7Z368 130 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 PLK4O00444 970 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 VILLO15195 856 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 PCDHGA12O60330 932 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 GRAP2O75791 330 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 DKK1O94907 266 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 GOT1P17174 413 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 MTIF2P46199 727 aaKnown RBP11.51□□□□□ -0.57
TARDBP-221ENST00000619555 C21orf59P57076 290 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 RACK1P63244 317 aaKnown RBP11.51□□□□□ -0.57
TARDBP-221ENST00000619555 CDK17Q00537 523 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 SFSWAPQ12872 951 aaKnown RBP11.51□□□□□ -0.57
TARDBP-221ENST00000619555 CCDC157Q569K6 752 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 TCP11X2Q5H9J9 407 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 FBXL22Q6P050 247 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 PASD1Q8IV76 773 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 CCAR2Q8N163 923 aaKnown RBP11.51□□□□□ -0.57
TARDBP-221ENST00000619555 OR2T34Q8NGX1 318 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 MDM1Q8TC05 714 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 RNF34Q969K3 372 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 PPP1R13BQ96KQ4 1090 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 SLC2A13Q96QE2 648 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 ACE2Q9BYF1 805 aaPredicted RBP11.51□□□□□ -0.57
TARDBP-221ENST00000619555 CCDC86Q9H6F5 360 aaKnown RBP11.51□□□□□ -0.57
TARDBP-221ENST00000619555 FANCLQ9NW38 375 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 ADAMTS1Q9UHI8 967 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 SLC12A6Q9UHW9 1150 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 AJAP1Q9UKB5 411 aaPredicted RBP11.51□□□□□ -0.57
TARDBP-221ENST00000619555 FZD4Q9ULV1 537 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
TARDBP-221ENST00000619555 A0A1B0GTQ1 180 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 A0A1W2PR77 199 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 TNFSF14O43557 240 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 IL1BP01584 269 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 PTMSP20962 102 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 C5AR1P21730 350 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 PON1P27169 355 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 GGCXP38435 758 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 GRK6P43250 576 aa11.5□□□□□ -0.57
TARDBP-221ENST00000619555 IRAK1P51617 712 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms