RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RAD50Q92878 1312 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 FNDC1Q4ZHG4 1894 aaPredicted RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 C2orf16Q68DN1 1984 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 LAMA5O15230 3695 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 IGF2RP11717 2491 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 HIDE1A8MVS5 230 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 GOLGA6L6A8MZA4 724 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 PYCARD-AS1I3L0S3 204 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 M0QYG6 137 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 LEFTY2O00292 366 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 TCEA3O75764 348 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 CHRNA1P02708 482 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 MT-ND5P03915 603 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 ANXA2P07355 339 aaKnown RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 ATF7P17544 494 aaPredicted RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 ABCB4P21439 1286 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 KLRC1P26715 233 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 CA8P35219 290 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 SLC1A4P43007 532 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 STAT2P52630 851 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 OAZ1P54368 228 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 RPS6P62753 249 aaKnown RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 NHLH2Q02577 135 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 RARS2Q5T160 578 aaKnown RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 AACSQ86V21 672 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 ZNF444Q8N0Y2 327 aaPredicted RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 ZNF808Q8N4W9 903 aaPredicted RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 SLC15A4Q8N697 577 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 OR56A3Q8NH54 315 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 Q8TCH9 128 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 CHURC1Q8WUH1 139 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 PPP2R3CQ969Q6 453 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 IQCDQ96DY2 449 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 TAAR1Q96RJ0 339 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 REXO4Q9GZR2 422 aaKnown RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 RNPEPQ9H4A4 650 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 GPR108Q9NPR9 543 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 SETD4Q9NVD3 440 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 ETAA1Q9NY74 926 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 ADD3Q9UEY8 706 aaKnown RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 LRCH1Q9Y2L9 728 aa6□□□□□ -1.45
SF3B3-214ENST00000572365 DYNC1LI1Q9Y6G9 523 aaKnown RBP6□□□□□ -1.45
SF3B3-214ENST00000572365 MIA3Q5JRA6 1907 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 EVPLQ92817 2033 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 SMG1Q96Q15 3661 aaKnown RBP5.99□□□□□ -1.45
SF3B3-214ENST00000572365 TMEM233B4DJY2 109 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 F5H423 210 aaPredicted RBP5.99□□□□□ -1.45
SF3B3-214ENST00000572365 MYO1CO00159 1063 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 ZNF623O75123 536 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 KIF20AO95235 890 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 GH1P01241 217 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 ITGB3P05106 788 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 ACO1P21399 889 aaKnown RBP5.99□□□□□ -1.45
SF3B3-214ENST00000572365 PBX3P40426 434 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 VIPR2P41587 438 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 TRAPPC10P48553 1259 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 MAN2A2P49641 1150 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 WNT3P56703 355 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 PIGFQ07326 219 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 DMWDQ09019 674 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 DUSP6Q16828 381 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 CCDC96Q2M329 555 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 ARL13BQ3SXY8 428 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 USH1GQ495M9 461 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 DCAF12L1Q5VU92 463 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 TSSK4Q6SA08 328 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 RNF207Q6ZRF8 634 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 Q6ZRM9 215 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 SERINC5Q86VE9 423 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 CFAP52Q8N1V2 620 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 ZNF689Q96CS4 500 aaPredicted RBP5.99□□□□□ -1.45
SF3B3-214ENST00000572365 MARS2Q96GW9 593 aaKnown RBP5.99□□□□□ -1.45
SF3B3-214ENST00000572365 WWC2-AS2Q96NR7 200 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 PNKPQ96T60 521 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 CRB3Q9BUF7 120 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 GPR87Q9BY21 358 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 CHST8Q9H2A9 424 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 CPVLQ9H3G5 476 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 BOLA2Q9H3K6 86 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 ATP8A2Q9NTI2 1148 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 MRPS18AQ9NVS2 196 aaKnown RBP5.99□□□□□ -1.45
SF3B3-214ENST00000572365 MTMR4Q9NYA4 1195 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 XPR1Q9UBH6 696 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 HESX1Q9UBX0 185 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 EMSYQ7Z589 1322 aa5.99□□□□□ -1.45
SF3B3-214ENST00000572365 IGKV6D-41A0A0C4DH26 115 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.98□□□□□ -1.45
SF3B3-214ENST00000572365 C17orf102A2RUQ5 167 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 CLCA1A8K7I4 914 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 DIRC3C9JPN6 131 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 HAS3O00219 553 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 THAP12O43422 761 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 SMIM10L2AP0DMW4 78 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 SMIM10L2BP0DMW5 78 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 HARSP12081 509 aaKnown RBP5.98□□□□□ -1.45
SF3B3-214ENST00000572365 GLULP15104 373 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 APOBEC3AP31941 199 aaPredicted RBP5.98□□□□□ -1.45
SF3B3-214ENST00000572365 HSPA7P48741 367 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 SCNN1GP51170 649 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 TFAP4Q01664 338 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms