RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ABCB8Q9NUT2 735 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 WSB2Q9NYS7 404 aaPredicted RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 USP36Q9P275 1121 aaKnown RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 STOML2Q9UJZ1 356 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 NENFQ9UMX5 172 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 SLC6A14Q9UN76 642 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 PAXBP1Q9Y5B6 917 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 SLCO1B1Q9Y6L6 691 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 WDFY3Q8IZQ1 3526 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 SPAARA0A1B0GVQ0 90 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 NDUFS2O75306 463 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 IGLV3-27P01718 113 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 EPHX1P07099 455 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 SERPINF2P08697 491 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 DESP17661 470 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 CD6P30203 668 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 CD70P32970 193 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 CYLC1P35663 651 aaPredicted RBP16.18■□□□□ 0.18
USB1-208ENST00000563207 NUMBP49757 651 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 TBX4P57082 545 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
USB1-208ENST00000563207 LMAN2Q12907 356 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 EIF4EBP2Q13542 120 aaPredicted RBP16.18■□□□□ 0.18
USB1-208ENST00000563207 GSE1Q14687 1217 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 PTPRNQ16849 979 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 ADGRF1Q5T601 910 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 CHST9Q7L1S5 443 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 FAM124AQ86V42 546 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 RGL4Q8IZJ4 473 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 NPY6RQ99463 290 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 ITM2CQ9NQX7 267 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 METTL5Q9NRN9 209 aaKnown RBP16.18■□□□□ 0.18
USB1-208ENST00000563207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.18■□□□□ 0.18
USB1-208ENST00000563207 STIM2Q9P246 746 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 CNOT8Q9UFF9 292 aaKnown RBP16.18■□□□□ 0.18
USB1-208ENST00000563207 XPO7Q9UIA9 1087 aaKnown RBP16.18■□□□□ 0.18
USB1-208ENST00000563207 ZFHX4Q86UP3 3567 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 ASPMQ8IZT6 3477 aa16.18■□□□□ 0.18
USB1-208ENST00000563207 C2CD4BA6NLJ0 364 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 ZBTB24O43167 697 aaPredicted RBP16.17■□□□□ 0.18
USB1-208ENST00000563207 IRAK2O43187 625 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 TBL1XO60907 577 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 PDGFRAP16234 1089 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 CSRP1P21291 193 aaKnown RBP16.17■□□□□ 0.18
USB1-208ENST00000563207 PTPN9P43378 593 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 PITX1P78337 314 aaPredicted RBP16.17■□□□□ 0.18
USB1-208ENST00000563207 SHC2P98077 582 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 SEMA3BQ13214 749 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 MAMLD1Q13495 774 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 STARD3Q14849 445 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 NUMA1Q14980 2115 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 ST3GAL2Q16842 350 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 PPP1R15BQ5SWA1 713 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 PIK3R6Q5UE93 754 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 DCUN1D2Q6PH85 259 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 SERPINA13PQ6UXR4 307 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 SND1Q7KZF4 910 aaKnown RBP eCLIP16.17■□□□□ 0.18
USB1-208ENST00000563207 KIAA0907Q7Z7F0 614 aaPredicted RBP16.17■□□□□ 0.18
USB1-208ENST00000563207 PIP4P1Q86T03 277 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 TAC4Q86UU9 113 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 MINDY1Q8N5J2 469 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 ZNF653Q96CK0 615 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 SIPA1Q96FS4 1042 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 SLC39A13Q96H72 371 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 FCRL2Q96LA5 508 aaPredicted RBP16.17■□□□□ 0.18
USB1-208ENST00000563207 PRICKLE1Q96MT3 831 aaPredicted RBP16.17■□□□□ 0.18
USB1-208ENST00000563207 CAMK1GQ96NX5 476 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 SLC2A11Q9BYW1 496 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 IRX2Q9BZI1 471 aaPredicted RBP16.17■□□□□ 0.18
USB1-208ENST00000563207 TMEM245Q9H330 911 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 LUC7LQ9NQ29 371 aaKnown RBP16.17■□□□□ 0.18
USB1-208ENST00000563207 DDIT4Q9NX09 232 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 SLC12A6Q9UHW9 1150 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 INTUQ9ULD6 942 aa16.17■□□□□ 0.18
USB1-208ENST00000563207 USP24Q9UPU5 2620 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 C1QTNF9BB2RNN3 333 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 M0QYT0 321 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 SYNCRIPO60506 623 aaKnown RBP16.16■□□□□ 0.18
USB1-208ENST00000563207 ENDOD1O94919 500 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 LCA5LO95447 670 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 APOEP02649 317 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 H2AFZP0C0S5 128 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 C1QTNF9P0C862 333 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 CEACAM1P13688 526 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 CD59P13987 128 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 SDC4P31431 198 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 CCR1P32246 355 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
USB1-208ENST00000563207 FLT3P36888 993 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 SLC11A2P49281 568 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 RPS24P62847 133 aaKnown RBP16.16■□□□□ 0.18
USB1-208ENST00000563207 ACBD5Q5T8D3 534 aaPredicted RBP16.16■□□□□ 0.18
USB1-208ENST00000563207 H2AFVQ71UI9 128 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 STRADAQ7RTN6 431 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 BNIPLQ7Z465 357 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 CFAP52Q8N1V2 620 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 FNIP1Q8TF40 1166 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 UCMAQ8WVF2 138 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 RXFP2Q8WXD0 754 aa16.16■□□□□ 0.18
USB1-208ENST00000563207 LMLNQ96KR4 655 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms