RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PHF13Q86YI8 300 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 DEFB119Q8N690 84 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 ZNF366Q8N895 744 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 DNASE2BQ8WZ79 361 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 IGSF8Q969P0 613 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 GPR174Q9BXC1 333 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 ADAM22Q9P0K1 906 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 NCKAP1Q9Y2A7 1128 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 TBC1D30Q9Y2I9 924 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 CACNA1EQ15878 2313 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 DRGXA6NNA5 263 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 C4orf47A7E2U8 309 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 METTL12A8MUP2 240 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 MEI4A8MW99 385 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 CFIP05156 583 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 SYPP08247 313 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 TFE3P19532 575 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 SDC4P31431 198 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 ATXN3P54252 364 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 TPM4P67936 248 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 CLEC16AQ2KHT3 1053 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 PPM1JQ5JR12 505 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 C9orf64Q5T6V5 341 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 CXorf57Q6NSI4 855 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 SETD3Q86TU7 594 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 APCDD1Q8J025 514 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 CFAP57Q96MR6 1250 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 AGPAT1Q99943 283 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 C11orf70Q9BRQ4 267 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 FEM1AQ9BSK4 669 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 ADAM33Q9BZ11 813 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 BTBD1Q9H0C5 482 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 RETREG1Q9H6L5 497 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 SGK2Q9HBY8 427 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 CAPN10Q9HC96 672 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 CD93Q9NPY3 652 aa13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 METTL5Q9NRN9 209 aaKnown RBP13.54□□□□□ -0.24
HNRNPC-205ENST00000553300 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 A0A1W2PQC6 194 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 CDX4O14627 284 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 SIN3BO75182 1162 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 KRT3P12035 628 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 ENGP17813 658 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 CTSOP43234 321 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 PTPN9P43378 593 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 KRT83P78385 493 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 STRADAQ7RTN6 431 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 C14orf80Q86SX3 495 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 CIR1Q86X95 450 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 C3orf20Q8ND61 904 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 SLC30A5Q8TAD4 765 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 ALG14Q96F25 216 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 PCDHB18PQ96TA0 734 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 FUCA2Q9BTY2 467 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 EDEM3Q9BZQ6 932 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 SLCO3A1Q9UIG8 710 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 SLC25A13Q9UJS0 675 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 VPS28Q9UK41 221 aa13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-205ENST00000553300 A0A1B0GTH6 734 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 A0A1B0GTW7 788 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 MED19A0JLT2 244 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ANKRD62A6NC57 917 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 C2CD4BA6NLJ0 364 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 TTC34A8MYJ7 566 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 TEX33O43247 280 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 SEMA4FO95754 770 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ATP11AP98196 1134 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ELAVL3Q14576 367 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 IQCB1Q15051 598 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 C6orf118Q5T5N4 469 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 DCAF12L1Q5VU92 463 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ZNF783Q6ZMS7 281 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 IRF2BP2Q7Z5L9 587 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 DSG4Q86SJ6 1040 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 CACUL1Q86Y37 369 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ZNF683Q8IZ20 524 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 EMC1Q8N766 993 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 RXFP2Q8WXD0 754 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 CENPIQ92674 756 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 PTPRN2Q92932 1015 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 RPL10LQ96L21 214 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 C2orf49Q9BVC5 232 aaPredicted RBP13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 SELENOOQ9BVL4 669 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ZDHHC5Q9C0B5 715 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 MUC3BQ9H195 1237 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 PABPC3Q9H361 631 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ANLNQ9NQW6 1124 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 PPARGC1AQ9UBK2 798 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 FZD4Q9ULV1 537 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 TPX2Q9ULW0 747 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 OR51B4Q9Y5P0 310 aa13.52□□□□□ -0.25
HNRNPC-205ENST00000553300 ASCC3Q8N3C0 2202 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-205ENST00000553300 E9PAM4 449 aa13.51□□□□□ -0.25
HNRNPC-205ENST00000553300 I6L893 689 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms