RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ZNF295-AS1Q8N0V1 137 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 OR2T3Q8NH03 318 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 BAHD1Q8TBE0 780 aaPredicted RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 RNF139Q8WU17 664 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 UCMAQ8WVF2 138 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 KLK6Q92876 244 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 MYO19Q96H55 970 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 IPO9Q96P70 1041 aaKnown RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 NUP58Q9BVL2 599 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 IMPG2Q9BZV3 1241 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 NEUROG2Q9H2A3 272 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 TMEM245Q9H330 911 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 CYP3A43Q9HB55 503 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 LRRC4Q9HBW1 653 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 CLIC5Q9NZA1 410 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 COX16Q9P0S2 106 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 STRIP2Q9ULQ0 834 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 NAALADL1Q9UQQ1 740 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 ZNF462Q96JM2 2506 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 MUC22E2RYF6 1773 aaPredicted RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PIEZO2Q9H5I5 2752 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 M0QYV0 167 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 O00370 1275 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 TLX3O43711 291 aaPredicted RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 BNIP3LO60238 219 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 RNASEH2AO75792 299 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 ZNF202O95125 648 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 FYNP06241 537 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 CHKAP35790 457 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 CSKP41240 450 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 HARS2P49590 506 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 GALCP54803 685 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 DAOAP59103 153 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PSMA6P60900 246 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PPP2CBP62714 309 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PPP2CAP67775 309 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 CUL2Q13617 745 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PREPLQ4J6C6 727 aaPredicted RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 MPPE1Q53F39 396 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 SGO2Q562F6 1265 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PIK3R6Q5UE93 754 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 SYPL2Q5VXT5 272 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 RAP1GAP2Q684P5 730 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 ARHGAP17Q68EM7 881 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 DENND1BQ6P3S1 775 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 GJB7Q6PEY0 223 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 TMEM270Q6UE05 265 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 INTS8Q75QN2 995 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PRICKLE2Q7Z3G6 844 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 ADAT2Q7Z6V5 191 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 SIX6OS1Q8N1H7 587 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 STK40Q8N2I9 435 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 AADATQ8N5Z0 425 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 EID2Q8N6I1 236 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 UBR7Q8N806 425 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 FBXL13Q8NEE6 735 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 CADM4Q8NFZ8 388 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 OR52K2Q8NGK3 314 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 ZDHHC1Q8WTX9 485 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 NAF1Q96HR8 494 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 LMLNQ96KR4 655 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 MRGPRX3Q96LB0 322 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 DUSP9Q99956 384 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 DCLK3Q9C098 648 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 AASDHPPTQ9NRN7 309 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 FBXL12Q9NXK8 326 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 SUSD2Q9UGT4 822 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 CYTH4Q9UIA0 394 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PLA2G4CQ9UP65 541 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 APOBEC2Q9Y235 224 aaKnown RBP7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 PCDHB4Q9Y5E5 795 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 SNX10Q9Y5X0 201 aa7.1□□□□□ -1.27
PRPF40B-214ENST00000551320 H0Y626 953 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 XPO1O14980 1071 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 ACSL4O60488 711 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 RTN2O75298 545 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 GRAP2O75791 330 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 TRIM16O95361 564 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 CER1O95813 267 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 DNTTP04053 509 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 DLDP09622 509 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 POLR2EP19388 210 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 MZF1P28698 734 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 RDXP35241 583 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 CTSKP43235 329 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 AFF3P51826 1226 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 STX17P56962 302 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 TBX4P57082 545 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 BST2Q10589 180 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 POU4F2Q12837 409 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 SLC14A1Q13336 389 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 C4orf17Q53FE4 359 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 DCAF6Q58WW2 860 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 ZC3H12AQ5D1E8 599 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 ADGRF1Q5T601 910 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 C9orf64Q5T6V5 341 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 KIAA0895LQ68EN5 471 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 KLHL10Q6JEL2 608 aa7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-214ENST00000551320 CAPN12Q6ZSI9 719 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms