RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 KRT83P78385 493 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 DEUP1Q05D60 604 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 TRIP6Q15654 476 aaKnown RBP9.64□□□□□ -0.87
YBX3-218ENST00000546298 HLA-BQ31612 363 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 SLC25A52Q3SY17 297 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 C5orf22Q49AR2 442 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 FAM102AQ5T9C2 384 aaPredicted RBP9.64□□□□□ -0.87
YBX3-218ENST00000546298 TAF3Q5VWG9 929 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 FAM46CQ5VWP2 391 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 DPY19L2P1Q6NXN4 242 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 ADAT2Q7Z6V5 191 aaKnown RBP9.64□□□□□ -0.87
YBX3-218ENST00000546298 ZNF677Q86XU0 584 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 NAXDQ8IW45 347 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 OR2T34Q8NGX1 318 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 OR8D1Q8WZ84 308 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 IGSF8Q969P0 613 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 BIRC7Q96CA5 298 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 PGAP3Q96FM1 320 aaPredicted RBP9.64□□□□□ -0.87
YBX3-218ENST00000546298 RPL10LQ96L21 214 aaKnown RBP9.64□□□□□ -0.87
YBX3-218ENST00000546298 SPAG5Q96R06 1193 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 FAM129BQ96TA1 746 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 FEM1AQ9BSK4 669 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 NAA15Q9BXJ9 866 aaKnown RBP9.64□□□□□ -0.87
YBX3-218ENST00000546298 TKTL2Q9H0I9 626 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 SIK2Q9H0K1 926 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 NEUROG2Q9H2A3 272 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 TM7SF3Q9NS93 570 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 LMBRD1Q9NUN5 540 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 ANO10Q9NW15 660 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 TAB2Q9NYJ8 693 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 ADAMTS1Q9UHI8 967 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 VPS28Q9UK41 221 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 VANGL2Q9ULK5 521 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
YBX3-218ENST00000546298 HS3ST4Q9Y661 456 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 THADAQ6YHU6 1953 aa9.64□□□□□ -0.87
YBX3-218ENST00000546298 KIAA1549LQ6ZVL6 1849 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 A0A1W2PP55 124 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 A0A1W2PPC4 97 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 TMEM8BA6NDV4 472 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 F8VZ95 297 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 ALOX15BO15296 676 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 MID1O15344 667 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 FLRT2O43155 660 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 IL1BP01584 269 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 PROS1P07225 676 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 MZF1P28698 734 aaPredicted RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 PSMD8P48556 350 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 CCR5P51681 352 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 GALCP54803 685 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 RACK1P63244 317 aaKnown RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 CCDC15Q0P6D6 951 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 KIF19Q2TAC6 998 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 ACCSLQ4AC99 568 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 SLC45A4Q5BKX6 768 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 CXorf57Q6NSI4 855 aaKnown RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 NCEH1Q6PIU2 408 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 SASS6Q6UVJ0 657 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 ARCQ7LC44 396 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 SETD3Q86TU7 594 aaPredicted RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 CIR1Q86X95 450 aaPredicted RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 XYLT1Q86Y38 959 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 STK40Q8N2I9 435 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 SETD7Q8WTS6 366 aaKnown RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 PTPRN2Q92932 1015 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 NT5C3BQ969T7 300 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 C1orf74Q96LT6 269 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 CCDC114Q96M63 670 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 CDC6Q99741 560 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 C2orf49Q9BVC5 232 aaPredicted RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 SCNM1Q9BWG6 230 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 ACE2Q9BYF1 805 aaPredicted RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 ADAM33Q9BZ11 813 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 MUC3BQ9H195 1237 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 TM9SF3Q9HD45 589 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 PIGVQ9NUD9 493 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 ARHGEF38Q9NXL2 777 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 APOBEC2Q9Y235 224 aaKnown RBP9.63□□□□□ -0.87
YBX3-218ENST00000546298 ANKRD6Q9Y2G4 727 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 TBC1D30Q9Y2I9 924 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 NEUROG3Q9Y4Z2 214 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 EML5Q05BV3 1969 aa9.63□□□□□ -0.87
YBX3-218ENST00000546298 ACACBO00763 2458 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 VPS13AQ96RL7 3174 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 C1QTNF3-AMACRE9PGA6 284 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 GOLGA8SH3BPF8 625 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 VILLO15195 856 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 SLC7A4O43246 635 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 ATP9BO43861 1147 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 ADCY5O95622 1261 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 RHOCP08134 193 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 ZNF18P17022 549 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 SOX5P35711 763 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 NUDT1P36639 197 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 STAT1P42224 750 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 STK19P49842 368 aaPredicted RBP9.62□□□□□ -0.87
YBX3-218ENST00000546298 CCT8P50990 548 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 POLR2FP61218 127 aaKnown RBP9.62□□□□□ -0.87
YBX3-218ENST00000546298 CDR2Q01850 454 aa9.62□□□□□ -0.87
YBX3-218ENST00000546298 BNC1Q01954 994 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms