RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PTPRQQ9UMZ3 2332 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 CBX4O00257 560 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 LDOC1O95751 146 aaPredicted RBP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 DNTTP04053 509 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 ATP5BP06576 529 aaKnown RBP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 POLR2EP19388 210 aaKnown RBP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 USP8P40818 1118 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 C21orf59P57076 290 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 RPS14P62263 151 aaKnown RBP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 YWHAZP63104 245 aaKnown RBP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 ZBTB16Q05516 673 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 TARDBPQ13148 414 aaKnown RBP eCLIP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 DNAJC3Q13217 504 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 EXOC3L4Q17RC7 722 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 DCAF6Q58WW2 860 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 ZC3H12AQ5D1E8 599 aaKnown RBP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 PRAMEF14Q5SWL7 426 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 CARNMT1Q8N4J0 409 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 SHC3Q92529 594 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 BAP1Q92560 729 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 CNDP2Q96KP4 475 aaKnown RBP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 MRGPRX3Q96LB0 322 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 CPXM1Q96SM3 734 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 ORAI3Q9BRQ5 295 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 ACE2Q9BYF1 805 aaPredicted RBP12.27□□□□□ -0.45
GABPB1-206ENST00000543881 THAP9Q9H5L6 903 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 POPDC2Q9HBU9 364 aa12.27□□□□□ -0.45
GABPB1-206ENST00000543881 MYLKQ15746 1914 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 PLXNA2O75051 1894 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 GTPBP10A4D1E9 387 aaKnown RBP12.26□□□□□ -0.45
GABPB1-206ENST00000543881 CAPN9O14815 690 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 VILLO15195 856 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 RFPL3O75679 317 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 TRUB2O95900 331 aaKnown RBP12.26□□□□□ -0.45
GABPB1-206ENST00000543881 C1SP09871 688 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 PNMA6AP0CW24 399 aaPredicted RBP12.26□□□□□ -0.45
GABPB1-206ENST00000543881 CDK4P11802 303 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 CSKP41240 450 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 CTSOP43234 321 aaPredicted RBP12.26□□□□□ -0.45
GABPB1-206ENST00000543881 RACK1P63244 317 aaKnown RBP12.26□□□□□ -0.45
GABPB1-206ENST00000543881 RTP5Q14D33 572 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 RAP1GAP2Q684P5 730 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 DPY19L2P1Q6NXN4 242 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 GPR155Q7Z3F1 870 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 PASD1Q8IV76 773 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 LGI2Q8N0V4 545 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 MLKLQ8NB16 471 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 ELF4Q99607 663 aaPredicted RBP12.26□□□□□ -0.45
GABPB1-206ENST00000543881 DDX50Q9BQ39 737 aaKnown RBP12.26□□□□□ -0.45
GABPB1-206ENST00000543881 NRSN2Q9GZP1 204 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 FBRSQ9HAH7 460 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 SGK2Q9HBY8 427 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 CHMP5Q9NZZ3 219 aa12.26□□□□□ -0.45
GABPB1-206ENST00000543881 TEX51A0A1B0GUA7 166 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 LUC7L3O95232 432 aaKnown RBP12.25□□□□□ -0.45
GABPB1-206ENST00000543881 IGHV4-34P06331 123 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 ITGAVP06756 1048 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 ABCB4P21439 1286 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 TACR2P21452 398 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 MTIF2P46199 727 aaKnown RBP12.25□□□□□ -0.45
GABPB1-206ENST00000543881 DPCR1Q3MIW9 517 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
GABPB1-206ENST00000543881 PITRM1Q5JRX3 1037 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 HES3Q5TGS1 186 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 ZNF776Q68DI1 518 aaPredicted RBP12.25□□□□□ -0.45
GABPB1-206ENST00000543881 KIAA0895LQ68EN5 471 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 APCDD1Q8J025 514 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 DEFB106AQ8N104 65 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 SNIP1Q8TAD8 396 aaKnown RBP12.25□□□□□ -0.45
GABPB1-206ENST00000543881 FAM81BQ96LP2 452 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 SLC6A18Q96N87 628 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 SLC2A13Q96QE2 648 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 PRMT1Q99873 361 aaKnown RBP12.25□□□□□ -0.45
GABPB1-206ENST00000543881 TRIM62Q9BVG3 475 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 RSPH9Q9H1X1 276 aaPredicted RBP12.25□□□□□ -0.45
GABPB1-206ENST00000543881 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 SUN2Q9UH99 717 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 PCDHGC3Q9UN70 934 aa12.25□□□□□ -0.45
GABPB1-206ENST00000543881 A0A1W2PPC4 97 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 FAM47DPA6NHR8 397 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 TTC34A8MYJ7 566 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 KCNU1A8MYU2 1149 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 FOXN3O00409 490 aaPredicted RBP12.24□□□□□ -0.45
GABPB1-206ENST00000543881 SIN3BO75182 1162 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 GRAP2O75791 330 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 APOEP02649 317 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 ERBB2P04626 1255 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 CLCN1P35523 988 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 ACADVLP49748 655 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 NUMBP49757 651 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 CDH18Q13634 790 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 SHBQ15464 509 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 HNRNPA1L2Q32P51 320 aaKnown RBP12.24□□□□□ -0.45
GABPB1-206ENST00000543881 HSP90AA4PQ58FG1 418 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 MIIPQ5JXC2 388 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 FBXL19Q6PCT2 694 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 FAM183BPQ6ZVS7 135 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 SLC47A2Q86VL8 602 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 CHSY1Q86X52 802 aa12.24□□□□□ -0.45
GABPB1-206ENST00000543881 CIR1Q86X95 450 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms