RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CYP2D7A0A087X1C5 515 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 LOC101059948A0A1B0GTJ6 334 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 A0A1W2PQF6 199 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 GSTTP1A0A1W2PQM5 241 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 NPEPPSL1A6NEC2 478 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZSCAN5CA6NGD5 496 aaPredicted RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 STMND1H3BQB6 276 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 MASP2O00187 686 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRIM38O00635 465 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 HBP1O60381 514 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 RFPL1O75677 317 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 KAT7O95251 611 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 CKMP06732 381 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SRGAP2CP0DJJ0 459 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 DARSP14868 501 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 LIFP15018 202 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TGM2P21980 687 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 RPL13P26373 211 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 CD27P26842 260 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMOD1P28289 359 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 NTSR1P30989 418 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 HOXC12P31275 282 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 AVPR1AP37288 418 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 GRIA2P42262 883 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 IFNAR2P48551 515 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 HARS2P49590 506 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SELENOPP49908 381 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 PGDP52209 483 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 ITGA1P56199 1179 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 RACK1P63244 317 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 CALD1Q05682 793 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SSRP1Q08945 709 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TWF1Q12792 350 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 CDC20Q12834 499 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 PGM5Q15124 567 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TPGS2Q68CL5 300 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 OVOS1Q6IE37 1185 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 JMJD6Q6NYC1 403 aaPredicted RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 XKRXQ6PP77 449 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 CRIP3Q6Q6R5 217 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 CRTC3Q6UUV7 619 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 LAYNQ6UX15 382 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 C12orf54Q6X4T0 127 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 STOX1Q6ZVD7 989 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 ANKS3Q6ZW76 656 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 PLPPR4Q7Z2D5 763 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 MRPL10Q7Z7H8 261 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMEM200AQ86VY9 491 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 CIR1Q86X95 450 aaPredicted RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TSPYL6Q8N831 410 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 ST6GALNAC3Q8NDV1 305 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 WDR48Q8TAF3 677 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 IPO4Q8TEX9 1081 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 OSCP1Q8WVF1 389 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 JPH3Q8WXH2 748 aaPredicted RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 NRGNQ92686 78 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRCCQ92733 491 aaPredicted RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 USP7Q93009 1102 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 NKD1Q969G9 470 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARRDC3Q96B67 414 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SNRNP40Q96DI7 357 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 MBD6Q96DN6 1003 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC45A3Q96JT2 553 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 MRGPRX1Q96LB2 322 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 YTHDC1Q96MU7 727 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SCLT1Q96NL6 688 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 PTCHD1Q96NR3 888 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 RANBP9Q96S59 729 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 MAP7D2Q96T17 732 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 RBM15Q96T37 977 aaKnown RBP eCLIP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 PNKPQ96T60 521 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 YIPF4Q9BSR8 244 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 EFHD1Q9BUP0 239 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 CDH19Q9H159 772 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 ERVMER34-1Q9H9K5 563 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 KIF9Q9HAQ2 790 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TDP1Q9NUW8 608 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 ASF1BQ9NVP2 202 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 IFT57Q9NWB7 429 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 MAP3K20Q9NYL2 800 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SUCOQ9UBS9 1254 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 VTI1BQ9UEU0 232 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 GGT7Q9UJ14 662 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 ST6GALNAC2Q9UJ37 374 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TLK1Q9UKI8 766 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 AKT3Q9Y243 479 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 MRPL11Q9Y3B7 192 aaKnown RBP2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 GTF3C3Q9Y5Q9 886 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 FHOD1Q9Y613 1164 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC12A7Q9Y666 1083 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 DYSFO75923 2080 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 SEC16AO15027 2179 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 RYR2Q92736 4967 aa2.36□□□□□ -2.03
TRAV1-1-201ENST00000542354 TENM2Q9NT68 2774 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRAMEF33A0A0G2JMD5 474 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 TARSL2A2RTX5 802 aaKnown RBP2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 TLCD2A6NGC4 264 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARL5CA6NH57 179 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 TNFRSF10CO14798 259 aa2.35□□□□□ -2.03
TRAV1-1-201ENST00000542354 MUSKO15146 869 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms