RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ITPR3Q14573 2671 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 LRRK1Q38SD2 2015 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 EME2A4GXA9 379 aaPredicted RBP14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 SLC7A4O43246 635 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 STX6O43752 255 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 TBL1XO60907 577 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 CLSTN1O94985 981 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 LATS1O95835 1130 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 POU3F2P20265 443 aaPredicted RBP14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 CTSOP43234 321 aaPredicted RBP14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 MANEAQ5SRI9 462 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 MPP7Q5T2T1 576 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 SV2BQ7L1I2 683 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 JAMLQ86YT9 394 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 SLC22A18ASQ8N1D0 253 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 ARHGAP18Q8N392 663 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 ZSCAN1Q8NBB4 408 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 OR13H1Q8NG92 308 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 PTPRN2Q92932 1015 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 IFT43Q96FT9 208 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 EPSTI1Q96J88 318 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 CALN1Q9BXU9 219 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 PANK4Q9NVE7 773 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 NCKIPSDQ9NZQ3 722 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 SLCO3A1Q9UIG8 710 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 POLQO75417 2590 aa14.37□□□□□ -0.11
NKX3-1-202ENST00000523261 VNN1O95497 513 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 SRPRAP08240 638 aaKnown RBP14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 UGT1A5P35504 534 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 CASP4P49662 377 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 HNRNPKP61978 463 aaKnown RBP eCLIP14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 YWHAGP61981 247 aaKnown RBP eCLIP14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 BIRC3Q13489 604 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 NCOA4Q13772 614 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 ELAVL3Q14576 367 aaKnown RBP14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 DRAP1Q14919 205 aaPredicted RBP14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 ZNF542PQ5EBM4 170 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 PIK3R6Q5UE93 754 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 RFWD3Q6PCD5 774 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 MFN1Q8IWA4 741 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 FBXO39Q8N4B4 442 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 ZNF557Q8N988 423 aaPredicted RBP14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 ZNF548Q8NEK5 533 aaPredicted RBP14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 FIBINQ8TAL6 211 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 PLEKHO2Q8TD55 490 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 DUSP16Q9BY84 665 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 HBS1LQ9Y450 684 aaKnown RBP14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 CELSR2Q9HCU4 2923 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 SCN8AQ9UQD0 1980 aa14.36□□□□□ -0.11
NKX3-1-202ENST00000523261 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 SLC31A1O15431 190 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 TGFB1I1O43294 461 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 KIF20AO95235 890 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 PRLRP16471 622 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 CYP2J2P51589 502 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 KCNAB2Q13303 367 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 EIF3IQ13347 325 aaKnown RBP14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 PITRM1Q5JRX3 1037 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 AGBL4Q5VU57 503 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 WDR48Q8TAF3 677 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 NOX5Q96PH1 765 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 IRX2Q9BZI1 471 aaPredicted RBP14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 AGPAT3Q9NRZ7 376 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 DNAJC28Q9NX36 388 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 SEPT10Q9P0V9 454 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 SALL4Q9UJQ4 1053 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 TUBD1Q9UJT1 453 aa14.35□□□□□ -0.11
NKX3-1-202ENST00000523261 NVLO15381 856 aaKnown RBP14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 C4BPAP04003 597 aaKnown RBP14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 P4HA1P13674 534 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 VAV1P15498 845 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 SLC6A4P31645 630 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 ASPAP45381 313 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 INCA1Q0VD86 236 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 CNTN1Q12860 1018 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 SPIDRQ14159 915 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 MMS22LQ6ZRQ5 1243 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 STXBP4Q6ZWJ1 553 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 RAB11FIP2Q7L804 512 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 B3GNT8Q7Z7M8 397 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 DSG4Q86SJ6 1040 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 XXYLT1Q8NBI6 393 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 MIB2Q96AX9 1013 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 FZD3Q9NPG1 666 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 OLA1Q9NTK5 396 aaKnown RBP14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 STIM2Q9P246 746 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 SFMBT1Q9UHJ3 866 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 SARDHQ9UL12 918 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 CSNK1G3Q9Y6M4 447 aa14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 SPENQ96T58 3664 aaKnown RBP14.34□□□□□ -0.11
NKX3-1-202ENST00000523261 GOLGA6L7A0A1B0GV03 622 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 NTN3O00634 580 aaPredicted RBP14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 MUSKO15146 869 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 CLIC2O15247 247 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 HGFP14210 728 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 TRIM21P19474 475 aaKnown RBP14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 CD97P48960 835 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 POLE2P56282 527 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 TAS2R38P59533 333 aa14.33□□□□□ -0.12
NKX3-1-202ENST00000523261 ECT2LQ008S8 904 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms