RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PAAF1Q9BRP4 392 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 TRIM62Q9BVG3 475 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 VCX3AQ9NNX9 186 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 ZDHHC7Q9NXF8 308 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 LRFN2Q9ULH4 789 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 AP4E1Q9UPM8 1137 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 MYBPHLA2RUH7 354 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 CAPN14A8MX76 684 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 PDLIM1O00151 329 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 CLDN5O00501 218 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 TBX10O75333 385 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 PIM1P11309 404 aaPredicted RBP18.77■□□□□ 0.6
SDC2-202ENST00000518385 ETS1P14921 441 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 CRABP2P29373 138 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 MAGEA6P43360 314 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 TKTL1P51854 596 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 DSC1Q08554 894 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 WASHC5Q12768 1159 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 MMRN1Q13201 1228 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 IKBKEQ14164 716 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 INTS6LQ5JSJ4 861 aaKnown RBP18.77■□□□□ 0.6
SDC2-202ENST00000518385 FNBP1LQ5T0N5 605 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 RFWD3Q6PCD5 774 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 MYLK4Q86YV6 388 aaPredicted RBP18.77■□□□□ 0.6
SDC2-202ENST00000518385 PQLC3Q8N755 202 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 PCDH19Q8TAB3 1148 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 JADE3Q92613 823 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 PPP2R3CQ969Q6 453 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 FAM149B1Q96BN6 582 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 GBP5Q96PP8 586 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 TRIM4Q9C037 500 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 NDUFA13Q9P0J0 144 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 PAK5Q9P286 719 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 SAE1Q9UBE0 346 aaPredicted RBP18.77■□□□□ 0.6
SDC2-202ENST00000518385 TEX264Q9Y6I9 313 aa18.77■□□□□ 0.6
SDC2-202ENST00000518385 ENO4A6NNW6 628 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 TMEM189-UBE2V1I3L0A0 370 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 HOXA2O43364 376 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 KRT36O76013 467 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 DDHD2O94830 711 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 MYL2P10916 166 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 MYL4P12829 197 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 ITGB8P26012 769 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 SULT1E1P49888 294 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 ZNF135P52742 658 aaPredicted RBP18.76■□□□□ 0.59
SDC2-202ENST00000518385 CACNA2D1P54289 1103 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 MAP3K7CLP57077 242 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 DAOAP59103 153 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 ACTR3P61158 418 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 BBS9Q3SYG4 887 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 RAB6CQ53S08 254 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 CD300LGQ6UXG3 332 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 ZNF280BQ86YH2 543 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 NPAS4Q8IUM7 802 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 CDKL3Q8IVW4 592 aaPredicted RBP18.76■□□□□ 0.59
SDC2-202ENST00000518385 UNC45BQ8IWX7 931 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 SCUBE1Q8IWY4 988 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 RSPH1Q8WYR4 309 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 PGAP3Q96FM1 320 aaPredicted RBP18.76■□□□□ 0.59
SDC2-202ENST00000518385 CASD1Q96PB1 797 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 SMOQ99835 787 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 RAB6CQ9H0N0 254 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 NRDE2Q9H7Z3 1164 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 TBC1D13Q9NVG8 400 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 SIRPGQ9P1W8 387 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 SLC17A7Q9P2U7 560 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 FZD10Q9ULW2 581 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 H7C0C1 242 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 KRT38O76015 456 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 BEST1O76090 585 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 F9P00740 461 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 SERPINA6P08185 405 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 CYP2F1P24903 491 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 ARL4AP40617 200 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 ATP5OP48047 213 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 DSG1Q02413 1049 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 HNRNPDQ14103 355 aaKnown RBP18.76■□□□□ 0.59
SDC2-202ENST00000518385 DCAF6Q58WW2 860 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 RINLQ6ZS11 566 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 CYS1Q717R9 158 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 BEND5Q7L4P6 421 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 ZC3H18Q86VM9 953 aaKnown RBP18.76■□□□□ 0.59
SDC2-202ENST00000518385 LRRC6Q86X45 466 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 CRLF3Q8IUI8 442 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 COLGALT2Q8IYK4 626 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 ABI1Q8IZP0 508 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 PTPRN2Q92932 1015 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 CENPKQ9BS16 269 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 DHX35Q9H5Z1 703 aaKnown RBP18.76■□□□□ 0.59
SDC2-202ENST00000518385 DMAP1Q9NPF5 467 aaPredicted RBP18.76■□□□□ 0.59
SDC2-202ENST00000518385 PRDM5Q9NQX1 630 aaPredicted RBP18.76■□□□□ 0.59
SDC2-202ENST00000518385 NDE1Q9NXR1 346 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 PCDHB8Q9UN66 801 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 PLLPQ9Y342 182 aa18.76■□□□□ 0.59
SDC2-202ENST00000518385 SF3B1O75533 1304 aaKnown RBP eCLIP18.75■□□□□ 0.59
SDC2-202ENST00000518385 RTN3O95197 1032 aaPredicted RBP18.75■□□□□ 0.59
SDC2-202ENST00000518385 KLHL2O95198 593 aa18.75■□□□□ 0.59
SDC2-202ENST00000518385 RAG1P15918 1043 aa18.75■□□□□ 0.59
SDC2-202ENST00000518385 PRKCHP24723 683 aa18.75■□□□□ 0.59
SDC2-202ENST00000518385 CDC25CP30307 473 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms