RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 OXCT2Q9BYC2 517 aaPredicted RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 NUF2Q9BZD4 464 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 PNPLA3Q9NST1 481 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 OXSMQ9NWU1 459 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 TUBA8Q9NY65 449 aaPredicted RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 SUCOQ9UBS9 1254 aaKnown RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 SH3GLB1Q9Y371 365 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 LOC285556D6RIA3 1793 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 TRIM38O00635 465 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 ZNF189O75820 626 aaPredicted RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 MGAT1P26572 445 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 TCF7P36402 384 aaPredicted RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 PTPN9P43378 593 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 LSM12Q3MHD2 195 aaKnown RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 ZDHHC17Q8IUH5 632 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 TRIML2Q8N7C3 387 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 SMYD1Q8NB12 490 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 CXorf38Q8TB03 319 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 RCN3Q96D15 328 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 ATG4CQ96DT6 458 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 ASB9Q96DX5 294 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 PIWIL1Q96J94 861 aaKnown RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 KLHL32Q96NJ5 620 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 GATA5Q9BWX5 397 aaPredicted RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 SLC4A5Q9BY07 1137 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 IL22Q9GZX6 179 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 ZBTB26Q9HCK0 441 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 IGSF9Q9P2J2 1179 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 HESX1Q9UBX0 185 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 BLOC1S6Q9UL45 172 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 BARX2Q9UMQ3 279 aaPredicted RBP18.13■□□□□ 0.49
NUP54-205ENST00000507257 MYRFQ9Y2G1 1151 aa18.13■□□□□ 0.49
NUP54-205ENST00000507257 H0YIN7 160 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 RNASEH2AO75792 299 aaKnown RBP18.12■□□□□ 0.49
NUP54-205ENST00000507257 MAP3K6O95382 1288 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 HNRNPCP07910 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
NUP54-205ENST00000507257 DNAJB1P25685 340 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 HADHAP40939 763 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 CD97P48960 835 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 RPL14P50914 215 aaKnown RBP18.12■□□□□ 0.49
NUP54-205ENST00000507257 COG7P83436 770 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 PRKAA1Q13131 559 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 TMED1Q13445 227 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 IKBKEQ14164 716 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 SH3D19Q5HYK7 790 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 ZBTB8BQ8NAP8 495 aaPredicted RBP18.12■□□□□ 0.49
NUP54-205ENST00000507257 UBA3Q8TBC4 463 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 KHSRPQ92945 711 aaKnown RBP eCLIP18.12■□□□□ 0.494e-7■■■■□ 23.6
NUP54-205ENST00000507257 HEXIM2Q96MH2 286 aaKnown RBP18.12■□□□□ 0.49
NUP54-205ENST00000507257 C11orf84Q9BUA3 381 aaPredicted RBP18.12■□□□□ 0.49
NUP54-205ENST00000507257 DTLQ9NZJ0 730 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 IPO11Q9UI26 975 aaKnown RBP18.12■□□□□ 0.49
NUP54-205ENST00000507257 LCTP09848 1927 aa18.12■□□□□ 0.49
NUP54-205ENST00000507257 hCG_2014768A0A024R1R8 64 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 ACKR2O00590 384 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 STAU1O95793 577 aaKnown RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 PFKMP08237 780 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 KRT19P08727 400 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 IDO1P14902 403 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 SLC6A3Q01959 620 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 NSUN2Q08J23 767 aaKnown RBP eCLIP18.11■□□□□ 0.49
NUP54-205ENST00000507257 ORC1Q13415 861 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 SPIDRQ14159 915 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 PPM1LQ5SGD2 360 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 MAMDC4Q6UXC1 1216 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 TRIM67Q6ZTA4 783 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 LPCAT2Q7L5N7 544 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 EXOC8Q8IYI6 725 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 PLD6Q8N2A8 252 aaKnown RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 GALNT4Q8N4A0 578 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 RIN3Q8TB24 985 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 ADAMTS16Q8TE57 1224 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 CENPIQ92674 756 aaPredicted RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 EME1Q96AY2 570 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 PCYT2Q99447 389 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 OSBPL6Q9BZF3 934 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 ZNF358Q9NW07 568 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 RCOR3Q9P2K3 495 aaPredicted RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 PHIPQ8WWQ0 1821 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 ARHGEF37A1IGU5 675 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 C7orf72A4D263 438 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 ATP6V1G1O75348 118 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 MMP10P09238 476 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 CYP3A5P20815 502 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 DPP6P42658 865 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 CSRP3P50461 194 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 SNX16P57768 344 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 TRAP1Q12931 704 aaKnown RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 PDAP1Q13442 181 aaKnown RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 ART3Q13508 389 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 PPP6R3Q5H9R7 873 aaPredicted RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 FAM182AQ5T1J6 154 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 FAM160B1Q5W0V3 765 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 SNRNP48Q6IEG0 339 aaKnown RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 PAOXQ6QHF9 649 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 TMEM110Q86TL2 294 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 COLGALT1Q8NBJ5 622 aa18.11■□□□□ 0.49
NUP54-205ENST00000507257 ZBED3Q96IU2 234 aaPredicted RBP18.11■□□□□ 0.49
NUP54-205ENST00000507257 FAM167AQ96KS9 214 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms