RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SLC30A9Q6PML9 568 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 LVRNQ6Q4G3 990 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 TOGARAM2Q6ZUX3 1019 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 RNF144BQ7Z419 303 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 KDELC2Q7Z4H8 507 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 CCDC25Q86WR0 208 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 OIT3Q8WWZ8 545 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 LPAR1Q92633 364 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 CENPIQ92674 756 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 ZNF479Q96JC4 524 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 LYZL4Q96KX0 146 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 RBM38Q9H0Z9 239 aaKnown RBP3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 SIRT3Q9NTG7 399 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 ARL15Q9NXU5 204 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 TNFSF13BQ9Y275 285 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 PKP3Q9Y446 797 aa3.78□□□□□ -1.8
HMGB1P29-201ENST00000505659 MBD3L5A6NJ08 208 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 KCNJ18B7U540 433 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 GRM8O00222 908 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 SYT5O00445 386 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 PLIN1O60240 522 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 ACTL6BO94805 426 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 LARGE1O95461 756 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 IFNA2P01563 188 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 LYL1P12980 280 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 PRPH2P23942 346 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 TBXAS1P24557 533 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 TMPRSS3P57727 454 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 RHAGQ02094 409 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 ERV3-1Q14264 604 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 LRRC24Q50LG9 513 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 ZNF585BQ52M93 769 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 KLHL22Q53GT1 634 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 UBAP2Q5T6F2 1119 aaKnown RBP3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 SULT6B1Q6IMI4 303 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 SYNE3Q6ZMZ3 975 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 RRAGAQ7L523 313 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 TMEM200AQ86VY9 491 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 KLBQ86Z14 1044 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 SLC44A2Q8IWA5 706 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 VPS37AQ8NEZ2 397 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 BRD8Q9H0E9 1235 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 MYLK2Q9H1R3 596 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 ELAC1Q9H777 363 aaKnown RBP3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 PRDM8Q9NQV8 689 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 LIN7CQ9NUP9 197 aaKnown RBP3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 LRFN1Q9P244 771 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 TBC1D14Q9P2M4 693 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 DTX4Q9Y2E6 619 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 LRCH1Q9Y2L9 728 aa3.77□□□□□ -1.81
HMGB1P29-201ENST00000505659 SKAP2O75563 359 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 ITGA2BP08514 1039 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 SERPINF1P36955 418 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 RFX5P48382 616 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 POLE2P56282 527 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 TRAF1Q13077 416 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 ALG10Q5BKT4 473 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 ALG10BQ5I7T1 473 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 WASHC2DQ5SRD0 308 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 TTC22Q5TAA0 569 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 ATPAF1Q5TC12 328 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 PGBD2Q6P3X8 592 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 NFRKBQ6P4R8 1299 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 RASGRP2Q7LDG7 609 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 ANKS1BQ7Z6G8 1248 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 VPS52Q8N1B4 723 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 C7orf57Q8NEG2 295 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 CMASQ8NFW8 434 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 MIB2Q96AX9 1013 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 EID2BQ96D98 161 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 SLC39A13Q96H72 371 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 URB1-AS1Q96HZ7 61 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 RMDN3Q96TC7 470 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 ISCUQ9H1K1 167 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 PABPC3Q9H361 631 aaKnown RBP3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 ABHD16BQ9H3Z7 469 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 DAAM1Q9Y4D1 1078 aa3.76□□□□□ -1.81
HMGB1P29-201ENST00000505659 RPS10-NUDT3A0A1W2PQS6 291 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 NPIPB13A6NJU9 1138 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 NPIPB5A8MRT5 1133 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 BECN2A8MW95 431 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 NPIPB4C9JG80 1138 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 NGFRP08138 427 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 KLRC2P26717 231 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 TYK2P29597 1187 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 HTR3AP46098 478 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 PGGT1BP53609 377 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 AP2B1P63010 937 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 CDK18Q07002 472 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 PDCLQ13371 301 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 RPS6KA2Q15349 733 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 ERAP2Q6P179 960 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 MTFR2Q6P444 385 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 C1orf228Q6PIY5 440 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 KLHL17Q6TDP4 642 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 PARM1Q6UWI2 310 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 SLC16A12Q6ZSM3 486 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 Q6ZTK2 550 aa3.75□□□□□ -1.81
HMGB1P29-201ENST00000505659 RAB11FIP2Q7L804 512 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms