RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 HOXA6P31267 233 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 CTSOP43234 321 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-208ENST00000494334 PXNP49023 591 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-208ENST00000494334 DGKEP52429 567 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 TCEAL1Q15170 157 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 SPA17Q15506 151 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 BOLA3Q53S33 107 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 KCNT1Q5JUK3 1230 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 C6orf118Q5T5N4 469 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 RNF219Q5W0B1 726 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-208ENST00000494334 CPNE8Q86YQ8 564 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 RHOT2Q8IXI1 618 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 TSTD1Q8NFU3 115 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 RFFLQ8WZ73 363 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 ATOH1Q92858 354 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-208ENST00000494334 MYO19Q96H55 970 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 EPAS1Q99814 870 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 FEM1AQ9BSK4 669 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 FAM126AQ9BYI3 521 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-208ENST00000494334 DHX35Q9H5Z1 703 aaKnown RBP13.92□□□□□ -0.18
COL1A1-208ENST00000494334 RETREG1Q9H6L5 497 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 CD248Q9HCU0 757 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 NDFIP2Q9NV92 336 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 TFR2Q9UP52 801 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 PLA2G4CQ9UP65 541 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 RAD54BQ9Y620 910 aa13.92□□□□□ -0.18
COL1A1-208ENST00000494334 A0A0D9SEW6 157 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 MTA2O94776 668 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 ASLP04424 464 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 RARAP10276 462 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 HLA-EP13747 358 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 EPHB2P29323 1055 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 FNTBP49356 437 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 NRLP54845 237 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 GSDMDP57764 484 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 SLC25A11Q02978 314 aaKnown RBP13.91□□□□□ -0.18
COL1A1-208ENST00000494334 E2F5Q15329 346 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 SMTNL2Q2TAL5 461 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 HEATR6Q6AI08 1181 aaKnown RBP13.91□□□□□ -0.18
COL1A1-208ENST00000494334 TXNRD3NBQ6F5E7 133 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 KIAA1211LQ6NV74 962 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 PSTKQ8IV42 348 aaKnown RBP13.91□□□□□ -0.18
COL1A1-208ENST00000494334 ZBTB44Q8NCP5 570 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 MRGPRX3Q96LB0 322 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 KCTD15Q96SI1 283 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-208ENST00000494334 MUC3BQ9H195 1237 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 TMEM245Q9H330 911 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 ZWILCHQ9H900 591 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 POLMQ9NP87 494 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-208ENST00000494334 TMEM248Q9NWD8 314 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 ZSCAN32Q9NX65 697 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 LCMT1Q9UIC8 334 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 ERVW-1Q9UQF0 538 aa13.91□□□□□ -0.18
COL1A1-208ENST00000494334 REXO2Q9Y3B8 237 aaKnown RBP13.91□□□□□ -0.18
COL1A1-208ENST00000494334 TCRBV21S2A2A0A5A6 115 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 ILVBLA1L0T0 632 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 WASH4PA8MWX3 477 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 APBB3O95704 486 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 EPHX1P07099 455 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 PRKCHP24723 683 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 ARHGAP25P42331 645 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 ECT2LQ008S8 904 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 SULT2A1Q06520 285 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 MESDQ14696 234 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 FNDC3BQ53EP0 1204 aaKnown RBP13.9□□□□□ -0.18
COL1A1-208ENST00000494334 SERPINA13PQ6UXR4 307 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 ZNF783Q6ZMS7 281 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 LONP2Q86WA8 852 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 RASSF3Q86WH2 238 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 ACRBPQ8NEB7 543 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 OR7D4Q8NG98 312 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 ERLEC1Q96DZ1 483 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 RPL10LQ96L21 214 aaKnown RBP13.9□□□□□ -0.18
COL1A1-208ENST00000494334 PSMB7Q99436 277 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 LUC7LQ9NQ29 371 aaKnown RBP13.9□□□□□ -0.18
COL1A1-208ENST00000494334 FAM86C1Q9NVL1 165 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 EBF1Q9UH73 591 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 DNAI1Q9UI46 699 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 SLCO3A1Q9UIG8 710 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 VPS28Q9UK41 221 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 R4GN57 208 aa13.9□□□□□ -0.18
COL1A1-208ENST00000494334 MYO18AQ92614 2054 aaKnown RBP13.9□□□□□ -0.18
COL1A1-208ENST00000494334 CCDC163A0A0D9SF12 145 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 RCCD1A6NED2 376 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 TMEM110-MUSTN1A8MSY1 372 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 EEF2KO00418 725 aaKnown RBP13.89□□□□□ -0.19
COL1A1-208ENST00000494334 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 SRPRAP08240 638 aaKnown RBP13.89□□□□□ -0.19
COL1A1-208ENST00000494334 GOT1P17174 413 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 MAN1A1P33908 653 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 HTR7P34969 479 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 SSR1P43307 286 aaKnown RBP13.89□□□□□ -0.19
COL1A1-208ENST00000494334 STK19P49842 368 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-208ENST00000494334 TAS2R40P59535 323 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 TPI1P60174 286 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 ST8SIA6P61647 398 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 GNA12Q03113 381 aa13.89□□□□□ -0.19
COL1A1-208ENST00000494334 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms