RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZNF768Q9H5H4 540 aaKnown RBP4.9□□□□□ -1.63
VPS13A-211ENST00000484581 SH3GLB2Q9NR46 395 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 TLR8Q9NR97 1041 aaKnown RBP4.9□□□□□ -1.63
VPS13A-211ENST00000484581 SLC22A11Q9NSA0 550 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 MAP3K2Q9Y2U5 619 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 PCDHB2Q9Y5E7 798 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 NPIPB13A6NJU9 1138 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 NPIPB5A8MRT5 1133 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 TEX22C9J3V5 150 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 NPIPB4C9JG80 1138 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 VILLO15195 856 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 PROM1O43490 865 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 CA12O43570 354 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 DKC1O60832 514 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS13A-211ENST00000484581 NCR1O76036 304 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 NXPH3O95157 252 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 IL6RP08887 468 aaPredicted RBP4.89□□□□□ -1.63
VPS13A-211ENST00000484581 CSH1P0DML2 217 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 CSH2P0DML3 217 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 TMIGD3P0DMS9 266 aaPredicted RBP4.89□□□□□ -1.63
VPS13A-211ENST00000484581 PEPDP12955 493 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 IL11P20809 199 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 PSMB10P40306 273 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 MVDP53602 400 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 TPTEP56180 551 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 RPL7AP62424 266 aaKnown RBP4.89□□□□□ -1.63
VPS13A-211ENST00000484581 DEUP1Q05D60 604 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 EPS8Q12929 822 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 RESTQ13127 1097 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 NAA25Q14CX7 972 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 DUSP28Q4G0W2 176 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 TREML2Q5T2D2 321 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 C1QTNF12Q5T7M4 302 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 ARMC3Q5W041 872 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 DENND2CQ68D51 928 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 DPY19L3Q6ZPD9 716 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 PTCHD4Q6ZW05 846 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 MON1AQ86VX9 555 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 PRIMA1Q86XR5 153 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 ADGRG3Q86Y34 549 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 TTC39CQ8N584 583 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 SRBD1Q8N5C6 995 aaKnown RBP4.89□□□□□ -1.63
VPS13A-211ENST00000484581 ENDOVQ8N8Q3 282 aaKnown RBP4.89□□□□□ -1.63
VPS13A-211ENST00000484581 MYCBPAPQ8TBZ2 947 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 SSH3Q8TE77 659 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 XAGE5Q8WWM1 108 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 LPIN2Q92539 896 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 FKBP10Q96AY3 582 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 ZNF764Q96H86 408 aaPredicted RBP4.89□□□□□ -1.63
VPS13A-211ENST00000484581 NAF1Q96HR8 494 aaKnown RBP4.89□□□□□ -1.63
VPS13A-211ENST00000484581 FEM1CQ96JP0 617 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 C5orf34Q96MH7 638 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 MPHOSPH8Q99549 860 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 ADAM2Q99965 735 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 ALG8Q9BVK2 526 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 TXLNGYQ9BZA5 131 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 AKIP1Q9NQ31 210 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 HCFC1R1Q9NWW0 138 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 MPP6Q9NZW5 540 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 ANKFY1Q9P2R3 1169 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 TMEM5Q9Y2B1 443 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 COL4A3Q01955 1670 aa4.89□□□□□ -1.63
VPS13A-211ENST00000484581 ZNF213O14771 459 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 LPXNO60711 386 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 TJP3O95049 919 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 RHOP08100 348 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 DLDP09622 509 aaKnown RBP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 LYL1P12980 280 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 COX7A2P14406 83 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 ARSAP15289 507 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 DDX6P26196 483 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 DUSP1P28562 367 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 CD38P28907 300 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 CXCR5P32302 372 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 HNF1BP35680 557 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 BMPR1AP36894 532 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 AVPR1BP47901 424 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 EIF3BP55884 814 aaKnown RBP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 FAM189BP81408 668 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 CALD1Q05682 793 aaKnown RBP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 CCDC15Q0P6D6 951 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 PSMD6Q15008 389 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 SYCE2Q6PIF2 218 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 CYP20A1Q6UW02 462 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 IKBIPQ70UQ0 350 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 PRPF39Q86UA1 669 aaKnown RBP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 SIRT6Q8N6T7 355 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 ATP2A3Q93084 1043 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 BAG1Q99933 345 aaPredicted RBP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 HTATIP2Q9BUP3 242 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 ELOVL1Q9BW60 279 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 RNF26Q9BY78 433 aaPredicted RBP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 WDR11Q9BZH6 1224 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 CTDSP1Q9GZU7 261 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 ERVK-5Q9HDB9 667 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 SNX15Q9NRS6 342 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 ADARB2Q9NS39 739 aaKnown RBP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 EHD3Q9NZN3 535 aa4.88□□□□□ -1.63
VPS13A-211ENST00000484581 CFDP1Q9UEE9 299 aaPredicted RBP4.88□□□□□ -1.63
VPS13A-211ENST00000484581 GIMAP2Q9UG22 337 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms