RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 WDR59Q6PJI9 974 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 STRADAQ7RTN6 431 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 ZNF571Q7Z3V5 609 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-223ENST00000475146 ZNF683Q8IZ20 524 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 KDM1BQ8NB78 822 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 OR52K2Q8NGK3 314 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 FAM172AQ8WUF8 416 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 MCEEQ96PE7 176 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 ITM2CQ9NQX7 267 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 VPS28Q9UK41 221 aa24.72■■□□□ 1.55
CPNE1-223ENST00000475146 ATXN2Q99700 1313 aaKnown RBP24.71■■□□□ 1.55
CPNE1-223ENST00000475146 TTC34A8MYJ7 566 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 RHOCP08134 193 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 RRM1P23921 792 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 NNMTP40261 264 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 PBX1P40424 430 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 PRKCIP41743 596 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 STK19P49842 368 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-223ENST00000475146 TPMTP51580 245 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 PLK1P53350 603 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 HNRNPA1L2Q32P51 320 aaKnown RBP24.71■■□□□ 1.55
CPNE1-223ENST00000475146 TFAP2DQ7Z6R9 452 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 NETO1Q8TDF5 533 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 TOE1Q96GM8 510 aaKnown RBP24.71■■□□□ 1.55
CPNE1-223ENST00000475146 MUC3BQ9H195 1237 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 TSPY26PQ9H489 355 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 MPP6Q9NZW5 540 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 SLCO3A1Q9UIG8 710 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 NUP205Q92621 2012 aa24.71■■□□□ 1.55
CPNE1-223ENST00000475146 TCRBV5S1A1TA0A578 114 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 GDF9O60383 454 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 SIN3BO75182 1162 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 SKILP12757 684 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 SDHBP21912 280 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 ITPKAP23677 461 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 OXTRP30559 389 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 ZNF33AQ06730 810 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 ZNF776Q68DI1 518 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-223ENST00000475146 DCUN1D2Q6PH85 259 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 FAM124AQ86V42 546 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 HSPA12BQ96MM6 686 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 FEM1AQ9BSK4 669 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 SLC25A13Q9UJS0 675 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 TBC1D30Q9Y2I9 924 aa24.7■■□□□ 1.54
CPNE1-223ENST00000475146 ITIH6Q6UXX5 1313 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 EDDM13A0A1B0GTR0 161 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 DRGXA6NNA5 263 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 DNTTP04053 509 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 ADRA1BP35368 520 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 HDAC4P56524 1084 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 RPS14P62263 151 aaKnown RBP24.69■■□□□ 1.54
CPNE1-223ENST00000475146 PUM1Q14671 1186 aaKnown RBP eCLIP24.69■■□□□ 1.54
CPNE1-223ENST00000475146 TDRD12Q587J7 1177 aaKnown RBP24.69■■□□□ 1.54
CPNE1-223ENST00000475146 SYT12Q8IV01 421 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 CPLX3Q8WVH0 158 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 CENPIQ92674 756 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-223ENST00000475146 ALG14Q96F25 216 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 VCPIP1Q96JH7 1222 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 GPR174Q9BXC1 333 aa24.69■■□□□ 1.54
CPNE1-223ENST00000475146 WSB2Q9NYS7 404 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-223ENST00000475146 IGLV3-10A0A075B6K4 115 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 A0A1W2PQJ5 194 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 PATE3B3GLJ2 98 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 KHNYNO15037 678 aaKnown RBP24.68■■□□□ 1.54
CPNE1-223ENST00000475146 CCP110O43303 1012 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 ATMINO43313 823 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-223ENST00000475146 RNASEH1O60930 286 aaKnown RBP24.68■■□□□ 1.54
CPNE1-223ENST00000475146 TPM3P06753 285 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 DESP17661 470 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 DPP6P42658 865 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 ZNF143P52747 638 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-223ENST00000475146 RPL7AP62424 266 aaKnown RBP24.68■■□□□ 1.54
CPNE1-223ENST00000475146 ARID5BQ14865 1188 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 TTC31Q49AM3 519 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-223ENST00000475146 C6orf118Q5T5N4 469 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 LRSAM1Q6UWE0 723 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 SLC41A1Q8IVJ1 513 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 ZYG11BQ9C0D3 744 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 RXFP3Q9NSD7 469 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 DLL3Q9NYJ7 618 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 OR51B4Q9Y5P0 310 aa24.68■■□□□ 1.54
CPNE1-223ENST00000475146 TARSL2A2RTX5 802 aaKnown RBP24.67■■□□□ 1.54
CPNE1-223ENST00000475146 DDX3XO00571 662 aaKnown RBP eCLIP24.67■■□□□ 1.541e-13■■□□□ 12.3
CPNE1-223ENST00000475146 IGLV3-19P01714 112 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 OR1E1P30953 314 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 ZBTB16Q05516 673 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 PPP1R15BQ5SWA1 713 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 C9orf64Q5T6V5 341 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 SETD3Q86TU7 594 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-223ENST00000475146 DNAAF5Q86Y56 855 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 CCDC185Q8N715 623 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 FOXJ1Q92949 421 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 IQCDQ96DY2 449 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 EDEM2Q9BV94 578 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 XPO4Q9C0E2 1151 aaKnown RBP24.67■■□□□ 1.54
CPNE1-223ENST00000475146 RSPH9Q9H1X1 276 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-223ENST00000475146 TMEM74BQ9NUR3 256 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 OR12D3Q9UGF7 316 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 TNRC6BQ9UPQ9 1833 aaKnown RBP24.67■■□□□ 1.54
CPNE1-223ENST00000475146 FRYLO94915 3013 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms