RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 FAM129BQ96TA1 746 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 TRIM62Q9BVG3 475 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 MFRPQ9BY79 579 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 SEMA4CQ9C0C4 833 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 ZSCAN16Q9H4T2 348 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-205ENST00000470585 CPNE5Q9HCH3 593 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 STARD5Q9NSY2 213 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 ARHGAP20Q9P2F6 1191 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 SERGEFQ9UGK8 458 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 SEPT3Q9UH03 358 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 NUDT5Q9UKK9 219 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 FRMD4BQ9Y2L6 1034 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 CLIC4Q9Y696 253 aa7.05□□□□□ -1.28
SF3A3-205ENST00000470585 A0A087X0B3 334 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 FAM47DPA6NHR8 397 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 TMX2-CTNND1H3BSU7 103 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 TRIM38O00635 465 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 TPP1O14773 563 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 SCAMP1O15126 338 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 PPP6R2O75170 966 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 CSO75390 466 aaKnown RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 PIAS2O75928 621 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 CLSTN1O94985 981 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 HLA-DRAP01903 254 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 MPOP05164 745 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 MYL1P05976 194 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 HMBSP08397 361 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 ITGA2BP08514 1039 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 SETSIPP0DME0 302 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 PDIA4P13667 645 aaKnown RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 DRD3P35462 400 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 CSKP41240 450 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 TKTL1P51854 596 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 HNRNPKP61978 463 aaKnown RBP eCLIP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 ECT2LQ008S8 904 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 BST2Q10589 180 aaKnown RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 KCNMA1Q12791 1236 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 BNIP3Q12983 259 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 CDH18Q13634 790 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 LY6DQ14210 128 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 ISXQ2M1V0 245 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 PPP1R26Q5T8A7 1209 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 TTC39BQ5VTQ0 682 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 DMRTA1Q5VZB9 504 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 RNF219Q5W0B1 726 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 ZCCHC8Q6NZY4 707 aaKnown RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 BEND5Q7L4P6 421 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 BHLHA9Q7RTU4 235 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 MMAAQ8IVH4 418 aaKnown RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 ZC3H3Q8IXZ2 948 aaKnown RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 SLC25A45Q8N413 288 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 AADATQ8N5Z0 425 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 NAT6Q93015 286 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 KLHDC7BQ96G42 594 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 CLIC6Q96NY7 704 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 IPO9Q96P70 1041 aaKnown RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 TWNKQ96RR1 684 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 CCNL2Q96S94 520 aaPredicted RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 B3GNT4Q9C0J1 378 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 ABCG4Q9H172 646 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 SALL4Q9UJQ4 1053 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 KIAA1257Q9ULG3 409 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 ERVW-1Q9UQF0 538 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 TRAF3IP3Q9Y228 551 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 PCDHB1Q9Y5F3 818 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 PCDHGA7Q9Y5G6 932 aa7.04□□□□□ -1.28
SF3A3-205ENST00000470585 NYNRINQ9P2P1 1898 aaKnown RBP7.04□□□□□ -1.28
SF3A3-205ENST00000470585 RP1P56715 2156 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3DA0A087WVF3 549 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3IA0A087WXS9 549 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3EA0A087X179 549 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3KA0A087X1G2 549 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 A0A1B0GVM2 712 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3FA6NER0 549 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3LB9A6J9 549 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 C1QTNF3-AMACRE9PGA6 284 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 H3BM21 787 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 SART1O43290 800 aaKnown RBP7.03□□□□□ -1.28
SF3A3-205ENST00000470585 SUV39H1O43463 412 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 ACSL4O60488 711 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 STX10O60499 249 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBL1XO60907 577 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3HP0C7X1 549 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 GP1BBP13224 206 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 AKT2P31751 481 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 CD70P32970 193 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 RPIAP49247 311 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 CASP4P49662 377 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 VAMP7P51809 220 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 PLK1P53350 603 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 CLDN6P56747 220 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 YWHAEP62258 255 aaKnown RBP7.03□□□□□ -1.28
SF3A3-205ENST00000470585 FAM133BQ5BKY9 247 aaKnown RBP7.03□□□□□ -1.28
SF3A3-205ENST00000470585 PITRM1Q5JRX3 1037 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 PRAMEF14Q5SWL7 426 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 BSPRYQ5W0U4 402 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3GQ6DHY5 549 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 TBC1D3CQ6IPX1 549 aa7.03□□□□□ -1.28
SF3A3-205ENST00000470585 RBM44Q6ZP01 1051 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms