RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 A0A1B0GVM2 712 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 ILVBLA1L0T0 632 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 CCDC151A5D8V7 595 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 TCAF2A6NFQ2 919 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 H7C0C1 242 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 MFSD11O43934 449 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 CNTN5O94779 1100 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 KRT14P02533 472 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 BMP1P13497 986 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 CEBPBP17676 345 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 LTBRP36941 435 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 MTHFRP42898 656 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 ATP5OP48047 213 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 OXCT1P55809 520 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 SLC7A5Q01650 507 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 GUCY2DQ02846 1103 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 CAV1Q03135 178 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 USP4Q13107 963 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 ELF2Q15723 593 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 ZNF77Q15935 545 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 MPPE1Q53F39 396 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 RARS2Q5T160 578 aaKnown RBP13.08□□□□□ -0.32
TRAF4-208ENST00000469529 CES5AQ6NT32 575 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 ZC3H18Q86VM9 953 aaKnown RBP13.08□□□□□ -0.32
TRAF4-208ENST00000469529 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 HJURPQ8NCD3 748 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-208ENST00000469529 HTR3CQ8WXA8 447 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 SMARCD2Q92925 531 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 PNKPQ96T60 521 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 SLC39A8Q9C0K1 460 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 UBE2ZQ9H832 354 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-208ENST00000469529 EPB41L5Q9HCM4 733 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRAF4-208ENST00000469529 MFHAS1Q9Y4C4 1052 aa13.08□□□□□ -0.32
TRAF4-208ENST00000469529 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-208ENST00000469529 REV3LO60673 3130 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-208ENST00000469529 ARHGAP42A6NI28 874 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 MATN3O15232 486 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 LINC01565O15544 149 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 H2AFXP16104 143 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-208ENST00000469529 RBL1P28749 1068 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 ETFBP38117 255 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 GGCXP38435 758 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 MAGEA6P43360 314 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 HNRNPDQ14103 355 aaKnown RBP13.07□□□□□ -0.32
TRAF4-208ENST00000469529 PPP1R7Q15435 360 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 C6orf118Q5T5N4 469 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 TMCO4Q5TGY1 634 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 GSTA5Q7RTV2 222 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 PCGF5Q86SE9 256 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 ADGRG2Q8IZP9 1017 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 ZNF557Q8N988 423 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-208ENST00000469529 FAM71DQ8N9W8 422 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 MAML1Q92585 1016 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 FGF13Q92913 245 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 LRRC45Q96CN5 670 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 MYEOVQ96EZ4 313 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 P2RY11Q96G91 374 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 ASB16Q96NS5 453 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 NECTIN4Q96NY8 510 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 UHRF1Q96T88 793 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-208ENST00000469529 FAM118BQ9BPY3 351 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 FOXP3Q9BZS1 431 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 EPC1Q9H2F5 836 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 NDFIP2Q9NV92 336 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 MARK1Q9P0L2 795 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 PAK5Q9P286 719 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 TRHDEQ9UKU6 1024 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 CDH7Q9ULB5 785 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 CCL26Q9Y258 94 aa13.07□□□□□ -0.32
TRAF4-208ENST00000469529 TCF20Q9UGU0 1960 aaKnown RBP13.07□□□□□ -0.32
TRAF4-208ENST00000469529 A0A0A0MRY4 1105 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 RASA4BC9J798 803 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 SGK1O00141 431 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 TNFRSF10AO00220 468 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 TP73O15350 636 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 RASA4O43374 803 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 CACNG3O60359 315 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 MAFKO60675 156 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 OPHN1O60890 802 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 RAMP2O60895 175 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 PENKP01210 267 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 IRF1P10914 325 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 OR1E1P30953 314 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 RPL22P35268 128 aaKnown RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 IRAK1P51617 712 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 PLK1P53350 603 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 VSNL1P62760 191 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 RPS24P62847 133 aaKnown RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 IFI35P80217 286 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 WASHC5Q12768 1159 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 ZNF177Q13360 481 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 SERINC3Q13530 473 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 POLD3Q15054 466 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-208ENST00000469529 TEX44Q53QW1 395 aa13.06□□□□□ -0.32
TRAF4-208ENST00000469529 HEATR6Q6AI08 1181 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 330 ms