RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 FBXO21O94952 628 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 IL4RP24394 825 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 PTK6Q13882 451 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 HIC1Q14526 733 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 TMTC4Q5T4D3 741 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 DEPDC1Q5TB30 811 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 C16orf46Q6P387 395 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 ARRDC4Q8NCT1 418 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 CFAP61Q8NHU2 1237 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 PAFAH2Q99487 392 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 USP29Q9HBJ7 922 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 WHRNQ9P202 907 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 GYG2O15488 501 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 DGKIO75912 1065 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 GRIK1P39086 918 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 PTP4A2Q12974 167 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 MAP2K5Q13163 448 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 CRHR2Q13324 411 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 ITGA9Q13797 1035 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 BCL2A1Q16548 175 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 TTC30BQ8N4P2 665 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 ANKLE1Q8NAG6 615 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 BBOF1Q8ND07 529 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 RIN3Q8TB24 985 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 SLC7A6OSQ96CW6 309 aaPredicted RBP12.62□□□□□ -0.39
USP11-206ENST00000469080 SENP8Q96LD8 212 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 MECRQ9BV79 373 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 ZNF518BQ9C0D4 1074 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 EPB41L4BQ9H329 900 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 TRMT13Q9NUP7 481 aaKnown RBP12.62□□□□□ -0.39
USP11-206ENST00000469080 UBQLN1Q9UMX0 589 aaKnown RBP12.62□□□□□ -0.39
USP11-206ENST00000469080 SCN1AP35498 2009 aa12.62□□□□□ -0.39
USP11-206ENST00000469080 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
USP11-206ENST00000469080 TRIM49D1C9J1S8 452 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 USP1O94782 785 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 DARSP14868 501 aaKnown RBP12.61□□□□□ -0.39
USP11-206ENST00000469080 HOXA11P31270 313 aaPredicted RBP12.61□□□□□ -0.39
USP11-206ENST00000469080 GHRHRQ02643 423 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 ANKDD1AQ495B1 522 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 MARCH8Q5T0T0 291 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 SYPL2Q5VXT5 272 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 RNF43Q68DV7 783 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 KIAA1522Q9P206 1035 aaPredicted RBP12.61□□□□□ -0.39
USP11-206ENST00000469080 VPS51Q9UID3 782 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
USP11-206ENST00000469080 PTPN4P29074 926 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 FAAP100Q0VG06 881 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 DPYSL3Q14195 570 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 CCDC14Q49A88 953 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 Q6ZNX1 250 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 RNF135Q8IUD6 432 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 GSDMBQ8TAX9 411 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 IRGQQ8WZA9 623 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 COX4I2Q96KJ9 171 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 FAM193BQ96PV7 902 aaPredicted RBP12.61□□□□□ -0.39
USP11-206ENST00000469080 ADAM2Q99965 735 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 KLHL4Q9C0H6 718 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 NDE1Q9NXR1 346 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.61□□□□□ -0.39
USP11-206ENST00000469080 CHKBQ9Y259 395 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 ANKRD12Q6UB98 2062 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 E9PBE3 544 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 BNIP3LO60238 219 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 LPXNO60711 386 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 LSM8O95777 96 aaKnown RBP12.61□□□□□ -0.39
USP11-206ENST00000469080 CLPTM1O96005 669 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 TCEA1P23193 301 aaKnown RBP12.61□□□□□ -0.39
USP11-206ENST00000469080 PCSK6P29122 969 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 TRNP1Q6NT89 227 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 TFAP2DQ7Z6R9 452 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 RSPH3Q86UC2 560 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 BBS5Q8N3I7 341 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 ALLCQ8N6M5 410 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 CPT1BQ92523 772 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 PGM2Q96G03 612 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 CGREF1Q99674 301 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 RSAD1Q9HA92 442 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 UBN1Q9NPG3 1134 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 HACD3Q9P035 362 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 ZNF212Q9UDV6 495 aa12.61□□□□□ -0.39
USP11-206ENST00000469080 FUOMA2VDF0 154 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 TRMUO75648 421 aaKnown RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 PIGRP01833 764 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 ZBTB48P10074 688 aaPredicted RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 STT3AP46977 705 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 TAF1BQ53T94 588 aaPredicted RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 IQSEC1Q6DN90 963 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 PPIL6Q8IXY8 311 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 KLC2Q9H0B6 622 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 STX18Q9P2W9 335 aaKnown RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 ZFP69BQ9UJL9 534 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 ITGA11Q9UKX5 1188 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 ZNFX1Q9P2E3 1918 aaKnown RBP12.6□□□□□ -0.39
USP11-206ENST00000469080 MDM4O15151 490 aa12.6□□□□□ -0.39
USP11-206ENST00000469080 VILLO15195 856 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms