RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 HNRNPABQ99729 332 aaKnown RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 ZNF7P17097 686 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 KCNA4P22459 653 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 SLC1A6P48664 564 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 CNGA3Q16281 694 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 PSMD5Q16401 504 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 TTC30BQ8N4P2 665 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 TDRD5Q8NAT2 981 aaKnown RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 FCRL2Q96LA5 508 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 DEFB118Q96PH6 123 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 PHACTR1Q9C0D0 580 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 TRIM45Q9H8W5 580 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 NMRAL1Q9HBL8 299 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 FAF1Q9UNN5 650 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 SLC27A5Q9Y2P5 690 aa14.06□□□□□ -0.16
BRAT1-203ENST00000467558 MRPL42Q9Y6G3 142 aaKnown RBP14.06□□□□□ -0.16
BRAT1-203ENST00000467558 GOLGA8TH3BQL2 631 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 IGSF6O95976 241 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 LAYNQ6UX15 382 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 GLT6D1Q7Z4J2 308 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 P2RY11Q96G91 374 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 CAPNS2Q96L46 248 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 PWWP2AQ96N64 755 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 TCRBV7S2A1N4TA0A589 114 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 NCF1BA6NI72 391 aaPredicted RBP14.05□□□□□ -0.16
BRAT1-203ENST00000467558 NCF1CA8MVU1 366 aaPredicted RBP14.05□□□□□ -0.16
BRAT1-203ENST00000467558 MDM4O15151 490 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 TLR5O60602 858 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 NCF1P14598 390 aaPredicted RBP14.05□□□□□ -0.16
BRAT1-203ENST00000467558 HDCP19113 662 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 WEE1P30291 646 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 TRIP10Q15642 601 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 CXorf38Q8TB03 319 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.16
BRAT1-203ENST00000467558 SIKE1Q9BRV8 207 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 TTPALQ9BTX7 342 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 SOX13Q9UN79 622 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 COL18A1P39060 1754 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 TTC36A6NLP5 189 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 TCN1P20061 433 aaPredicted RBP14.05□□□□□ -0.16
BRAT1-203ENST00000467558 CRADDP78560 199 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 BCL2L1Q07817 233 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 FAM187BQ17R55 369 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 LRRC43Q8N309 656 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 TMEM199Q8N511 208 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 EME1Q96AY2 570 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 OSBPL1AQ9BXW6 950 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 TAGLN3Q9UI15 199 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 PCDHA11Q9Y5I1 949 aa14.05□□□□□ -0.16
BRAT1-203ENST00000467558 ATG7O95352 703 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 RPA3P35244 121 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 PPM1AP35813 382 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 SERPINB5P36952 375 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 CLCNKBP51801 687 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 PLD5Q8N7P1 536 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 C12orf50Q8NA57 414 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 PRPF18Q99633 342 aaKnown RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 ACBD6Q9BR61 282 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 TCF7L2Q9NQB0 619 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 ANLNQ9NQW6 1124 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 RNASEH1O60930 286 aaKnown RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 PTPN4P29074 926 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 ASPAP45381 313 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 CREMQ03060 361 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 FOXD4Q12950 439 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 FLOT2Q14254 428 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 HIST2H2ACQ16777 129 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 ARMC12Q5T9G4 340 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 ARHGAP17Q68EM7 881 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 HIST2H2AA3Q6FI13 130 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 UNC5AQ6ZN44 842 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 USP6NLQ92738 828 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 HIPK3Q9H422 1215 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 NOD2Q9HC29 1040 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 EIF3LQ9Y262 564 aaKnown RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 Q9Y3F1 56 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 E9PBE3 544 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 AKAP10O43572 662 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 KLHL41O60662 606 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 MED21Q13503 144 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 INTS6LQ5JSJ4 861 aaKnown RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 SDHAF4Q5VUM1 108 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 IFNL1Q8IU54 200 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 ZC3H3Q8IXZ2 948 aaKnown RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 SLAIN1Q8ND83 568 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 PHF21BQ96EK2 531 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 NFKBIZQ9BYH8 718 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 CDHR5Q9HBB8 845 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 KDM1AO60341 852 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 EXOC3L1Q86VI1 746 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 CD99L2Q8TCZ2 262 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 ACMSDQ8TDX5 336 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 IRGQQ8WZA9 623 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 SPATA16Q9BXB7 569 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 UTP6Q9NYH9 597 aaKnown RBP14.04□□□□□ -0.16
BRAT1-203ENST00000467558 VTI1BQ9UEU0 232 aa14.04□□□□□ -0.16
BRAT1-203ENST00000467558 C10orf71Q711Q0 1435 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 C2CD4BA6NLJ0 364 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 EVPLLA8MZ36 301 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 PARNO95453 639 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms