RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 STAT4Q14765 748 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 STILQ15468 1287 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 TRADDQ15628 312 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 TMEM266Q2M3C6 531 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 PLEKHO1Q53GL0 409 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 USP39Q53GS9 565 aaKnown RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM47CQ5HY64 1035 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 RBM20Q5T481 1227 aaKnown RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 PRAMEF18Q5VWM3 479 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 KIAA1211LQ6NV74 962 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM122CQ6P4D5 195 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ERICH5Q6P6B1 374 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 SHQ1Q6PI26 577 aaKnown RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 LBX2Q6XYB7 198 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 GPR155Q7Z3F1 870 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ADCK1Q86TW2 530 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 DNAAF5Q86Y56 855 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 RIOX2Q8IUF8 465 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 Q8N1Y9 231 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 LIX1Q8N485 282 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 CELF2-AS1Q8N7Q2 184 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ATAD1Q8NBU5 361 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF461Q8TAF7 563 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 EXOC6Q8TAG9 804 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 PIP4K2CQ8TBX8 421 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 TEX47Q8TBZ9 253 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 DDX17Q92841 729 aaKnown RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 DACH2Q96NX9 599 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 SELENOSQ9BQE4 189 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 CARD6Q9BX69 1037 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 LGR4Q9BXB1 951 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 PACSIN1Q9BY11 444 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 TRIM2Q9C040 744 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARHGAP39Q9C0H5 1083 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 NEK6Q9HC98 313 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 C12orf4Q9NQ89 552 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 PIH1D3Q9NQM4 214 aaKnown RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 POLR3BQ9NW08 1133 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ADPRHL2Q9NX46 363 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ACTR3BQ9P1U1 418 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ING1Q9UK53 422 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANGPTL2Q9UKU9 493 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ERVK-19Q9WJR5 959 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 DERAQ9Y315 318 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ASB3Q9Y575 518 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 CAPN7Q9Y6W3 813 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 X6R8D5 127 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 LRRC7Q96NW7 1537 aa4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF644Q9H582 1327 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P9-201ENST00000441799 CROCC2H7BZ55 1655 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM135BQ49AJ0 1406 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SPATA31E1Q6ZUB1 1445 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ERBINQ96RT1 1412 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 A0A0A6YYJ9 748 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARHGEF37A1IGU5 675 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANKRD34BA5PLL1 514 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 NCF1BA6NI72 391 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 NCF1CA8MVU1 366 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PATE3B3GLJ2 98 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLCO1B7G3V0H7 640 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 MGRN1O60291 552 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 EFCAB14O75071 495 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CRTAMO95727 393 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 STARD3NLO95772 234 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 IFNA14P01570 189 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 LMNAP02545 664 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CHGBP05060 677 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SNRPAP09012 282 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 QDPRP09417 244 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SRGAP2CP0DJJ0 459 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SELLP14151 372 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 LPOP22079 712 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ADSSP30520 456 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 BMI1P35226 326 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 GARSP41250 739 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 RGS7P49802 495 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ADCY7P51828 1080 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 STARD6P59095 220 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 EEF1A1P68104 462 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 EEF1A2Q05639 463 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CDK18Q07002 472 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 GOLGA8FQ08AF8 430 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 GOLGA8DPQ0D2H9 430 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 KLF10Q13118 480 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SNAPC2Q13487 334 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 COL9A2Q14055 689 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 DMC1Q14565 340 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 HERC3Q15034 1050 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PPP2R5EQ16537 467 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 WHAMMP3Q1A5X7 153 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF674Q2M3X9 581 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 PDCD4Q53EL6 469 aaKnown RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 SPDYAQ5MJ70 313 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 CLVS2Q5SYC1 327 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 C12orf60Q5U649 245 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 EEF1A1P5Q5VTE0 462 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZNF772Q68DY9 489 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 GRAMD4Q6IC98 578 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 KIAA1841Q6NSI8 718 aa4.89□□□□□ -1.63
HMGB3P9-201ENST00000441799 IYDQ6PHW0 289 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms