RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 NOX5Q96PH1 765 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 CCDC86Q9H6F5 360 aaKnown RBP21.41■■□□□ 1.02
CPNE1-219ENST00000440240 FAM204AQ9H8W3 233 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 ASNSD1Q9NWL6 643 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 DDIT4Q9NX09 232 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 TOR4AQ9NXH8 423 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 KIAA1468Q9P260 1216 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 BTBD3Q9Y2F9 522 aa21.41■■□□□ 1.02
CPNE1-219ENST00000440240 BECN2A8MW95 431 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 TAF4O00268 1085 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 SLC9A1P19634 815 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 CCR5P51681 352 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 ELAVL3Q14576 367 aaKnown RBP21.4■■□□□ 1.02
CPNE1-219ENST00000440240 EXOC3L4Q17RC7 722 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 KCNT1Q5JUK3 1230 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 GJB7Q6PEY0 223 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 LAYNQ6UX15 382 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 DEFB106AQ8N104 65 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 STK40Q8N2I9 435 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 GALNT15Q8N3T1 639 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 WDTC1Q8N5D0 677 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 SLC2A13Q96QE2 648 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 PRMT1Q99873 361 aaKnown RBP21.4■■□□□ 1.02
CPNE1-219ENST00000440240 PCDHGC3Q9UN70 934 aa21.4■■□□□ 1.02
CPNE1-219ENST00000440240 A0A1B0GVM2 712 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 GTPBP10A4D1E9 387 aaKnown RBP21.39■■□□□ 1.01
CPNE1-219ENST00000440240 TCAF2A6NFQ2 919 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 HSF2BPO75031 334 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 IL1BP01584 269 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 PITX1P78337 314 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-219ENST00000440240 PTK2Q05397 1052 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 OR14C36Q8NHC7 312 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 SHC3Q92529 594 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 SLC6A18Q96N87 628 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 CPXM1Q96SM3 734 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 AASDHPPTQ9NRN7 309 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 ATRXP46100 2492 aa21.39■■□□□ 1.01
CPNE1-219ENST00000440240 ACACAQ13085 2346 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 A0A1B0GTQ1 180 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 GOLGA8CPA6NN73 597 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 PDGFRAP16234 1089 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 CD38P28907 300 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 PSMD8P48556 350 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 VASPP50552 380 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-219ENST00000440240 C11orf57Q6ZUT1 292 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-219ENST00000440240 DSG4Q86SJ6 1040 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 AADATQ8N5Z0 425 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 RPRD1AQ96P16 312 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-219ENST00000440240 SPAG5Q96R06 1193 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 ELF4Q99607 663 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-219ENST00000440240 EBF2Q9HAK2 575 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 LHX6Q9UPM6 363 aa21.38■■□□□ 1.01
CPNE1-219ENST00000440240 SYNJ2BP-COX16A0A087WUM0 186 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 C10orf142B7Z368 130 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 PON1P27169 355 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 MZF1P28698 734 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-219ENST00000440240 KRT9P35527 623 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 STK19P49842 368 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-219ENST00000440240 KCNJ12Q14500 433 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 SLC45A4Q5BKX6 768 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 FBXL22Q6P050 247 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 KDM4CQ9H3R0 1056 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 COX16Q9P0S2 106 aa21.37■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3DA0A087WVF3 549 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3IA0A087WXS9 549 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3EA0A087X179 549 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3KA0A087X1G2 549 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3FA6NER0 549 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3LB9A6J9 549 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3HP0C7X1 549 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 ADPRHP54922 357 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 ZNF177Q13360 481 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 AUHQ13825 339 aaKnown RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 CAMK4Q16566 473 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 FAM46CQ5VWP2 391 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3GQ6DHY5 549 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 OR6B2Q6IFH4 312 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3CQ6IPX1 549 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 CXorf57Q6NSI4 855 aaKnown RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 CIR1Q86X95 450 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 PASD1Q8IV76 773 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 TBC1D3Q8IZP1 549 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 MLKLQ8NB16 471 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 FRS2Q8WU20 508 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 SYNCQ9H7C4 482 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 GDF3Q9NR23 364 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 FTSJ1Q9UET6 329 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 SLC25A13Q9UJS0 675 aa21.36■■□□□ 1.01
CPNE1-219ENST00000440240 GOLGA4Q13439 2230 aaKnown RBP21.36■■□□□ 1.01
CPNE1-219ENST00000440240 KNTC1P50748 2209 aa21.35■■□□□ 1.01
CPNE1-219ENST00000440240 YKT6O15498 198 aa21.35■■□□□ 1.01
CPNE1-219ENST00000440240 SLC7A4O43246 635 aa21.35■■□□□ 1.01
CPNE1-219ENST00000440240 GRAP2O75791 330 aa21.35■■□□□ 1.01
CPNE1-219ENST00000440240 WNT1P04628 370 aa21.35■■□□□ 1.01
CPNE1-219ENST00000440240 NOS2P35228 1153 aa21.35■■□□□ 1.01
CPNE1-219ENST00000440240 MTIF2P46199 727 aaKnown RBP21.35■■□□□ 1.01
CPNE1-219ENST00000440240 UBE2HP62256 183 aa21.35■■□□□ 1.01
CPNE1-219ENST00000440240 IL9RQ01113 521 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms