RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 BST1Q10588 318 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 ZBTB17Q13105 803 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 STX3Q13277 289 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 TEX44Q53QW1 395 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 STXBP5Q5T5C0 1151 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 N4BP2L1Q5TBK1 243 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 CCSAPQ6IQ19 270 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 NAPEPLDQ6IQ20 393 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 GLB1LQ6UWU2 654 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 CES3Q6UWW8 571 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 RNF180Q86T96 592 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 LINC00523Q86TU6 105 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 MTDHQ86UE4 582 aaKnown RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 ZNF598Q86UK7 904 aaKnown RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 LRRTM3Q86VH5 581 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 ATPAF2Q8N5M1 289 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 TSGA13Q96PP4 275 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 FAM193BQ96PV7 902 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 ZIC5Q96T25 663 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 MLPHQ9BV36 600 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 SMOC2Q9H3U7 446 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 TRMT13Q9NUP7 481 aaKnown RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 SIRPGQ9P1W8 387 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 KANSL3Q9P2N6 904 aa10.67□□□□□ -0.7
CPNE1-218ENST00000439806 FNDC1Q4ZHG4 1894 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 NYNRINQ9P2P1 1898 aaKnown RBP10.67□□□□□ -0.7
CPNE1-218ENST00000439806 MYLKQ15746 1914 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 FAM237BA0A1B0GVD1 139 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 MAGEB16A2A368 324 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 HMX2A2RU54 273 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 INPPL1O15357 1258 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 FGF10O15520 208 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-218ENST00000439806 USP12O75317 370 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 WFS1O76024 890 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 CBX6O95503 412 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 JCHAINP01591 159 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 IGLV3-25P01717 112 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 MYL2P10916 166 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 EZRP15311 586 aaKnown RBP10.66□□□□□ -0.7
CPNE1-218ENST00000439806 CCNCP24863 283 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 DNAJB2P25686 324 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 PTPN4P29074 926 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 TYK2P29597 1187 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 CCR1P32246 355 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 CD68P34810 354 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-218ENST00000439806 GEMP55040 296 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 ZNF33AQ06730 810 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 CDK18Q07002 472 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 OLIG2Q13516 323 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 FRG1Q14331 258 aaKnown RBP10.66□□□□□ -0.7
CPNE1-218ENST00000439806 SMAD1Q15797 465 aaKnown RBP10.66□□□□□ -0.7
CPNE1-218ENST00000439806 ANKRD20A4Q4UJ75 823 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 SLC39A12Q504Y0 691 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 FASTKD1Q53R41 847 aaKnown RBP10.66□□□□□ -0.7
CPNE1-218ENST00000439806 KCTD11Q693B1 232 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 CLNKQ7Z7G1 428 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 LONP2Q86WA8 852 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 LZTR1Q8N653 840 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 SCAMP5Q8TAC9 235 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 NSL1Q96IY1 281 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 TEKT5Q96M29 485 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 TMEM237Q96Q45 408 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 HAPLN3Q96S86 360 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 RBBP8Q99708 897 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 GORASP1Q9BQQ3 440 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 WWP1Q9H0M0 922 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 RGS18Q9NS28 235 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 ABI2Q9NYB9 513 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-218ENST00000439806 KCNK4Q9NYG8 393 aa10.66□□□□□ -0.7
CPNE1-218ENST00000439806 GOLGB1Q14789 3259 aaKnown RBP10.66□□□□□ -0.7
CPNE1-218ENST00000439806 DNAJC6O75061 913 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 PAGE1O75459 146 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 ANXA9O76027 345 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 EOMESO95936 686 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 MPOP05164 745 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 ITGB1P05556 798 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 OR4Q2P0C623 313 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 HOXD10P28358 340 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 SERPINB3P29508 390 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 OR1G1P47890 313 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 GTF2A1P52655 376 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 ACLYP53396 1101 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 CSE1LP55060 971 aaKnown RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 RPL10AP62906 217 aaKnown RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 CDH17Q12864 832 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 PDE1CQ14123 709 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 PPP2R5DQ14738 602 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 INSCQ1MX18 579 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 PLEKHG4Q58EX7 1191 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 NOMO2Q5JPE7 1267 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 TIGD7Q6NT04 549 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 C16orf46Q6P387 395 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 STRA8Q7Z7C7 330 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 KCNMB4Q86W47 210 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 CEP57Q86XR8 500 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 ARID3BQ8IVW6 561 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 ARHGAP18Q8N392 663 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 CASP10Q92851 521 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 SKA1Q96BD8 255 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 GLT1D1Q96MS3 346 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms