RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 WDR45BQ5MNZ6 344 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 SIGIRRQ6IA17 410 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 CYP2R1Q6VVX0 501 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 UTS2BQ765I0 119 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 SV2AQ7L0J3 742 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 OTOP1Q7RTM1 612 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 PHF13Q86YI8 300 aaPredicted RBP13.06□□□□□ -0.32
HERC3-203ENST00000407637 RP9Q8TA86 221 aaKnown RBP13.06□□□□□ -0.32
HERC3-203ENST00000407637 DEPDC1BQ8WUY9 529 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 ZNF486Q96H40 463 aaPredicted RBP13.06□□□□□ -0.32
HERC3-203ENST00000407637 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
HERC3-203ENST00000407637 VCPIP1Q96JH7 1222 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 ADI1Q9BV57 179 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 IMPG2Q9BZV3 1241 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 SNX25Q9H3E2 840 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 C1orf112Q9NSG2 853 aa13.06□□□□□ -0.32
HERC3-203ENST00000407637 LOC105371267A0A1B0GV96 52 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 DLGAP1O14490 977 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 RGS13O14921 159 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 KMOO15229 486 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 GLRA3O75311 464 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 PRKCGP05129 697 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 MX2P20592 715 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 OSBPP22059 807 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 CXCR2P25025 360 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 EEF1DP29692 281 aaKnown RBP13.05□□□□□ -0.32
HERC3-203ENST00000407637 HOXA13P31271 388 aaPredicted RBP13.05□□□□□ -0.32
HERC3-203ENST00000407637 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
HERC3-203ENST00000407637 KRT76Q01546 638 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 GCNT1Q02742 428 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 BFSP2Q13515 415 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 BBS12Q6ZW61 710 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 TAS2R42Q7RTR8 314 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 ASB9Q96DX5 294 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 NOL6Q9H6R4 1146 aaKnown RBP13.05□□□□□ -0.32
HERC3-203ENST00000407637 VRTNQ9H8Y1 702 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 RAB6BQ9NRW1 208 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 SFMBT1Q9UHJ3 866 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 AGO2Q9UKV8 859 aaKnown RBP13.05□□□□□ -0.32
HERC3-203ENST00000407637 GPSM3Q9Y4H4 160 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 SMCHD1A6NHR9 2005 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 AURKAO14965 403 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 HSPA4LO95757 839 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 PRKCQQ04759 706 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 GRSF1Q12849 480 aaKnown RBP eCLIP13.05□□□□□ -0.32
HERC3-203ENST00000407637 PCM1Q15154 2024 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 CCDC58Q4VC31 144 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 TMEM198Q66K66 360 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 PPP4R4Q6NUP7 873 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 DCUN1D2Q6PH85 259 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 PIWIL3Q7Z3Z3 882 aaKnown RBP13.05□□□□□ -0.32
HERC3-203ENST00000407637 CCDC60Q8IWA6 550 aaPredicted RBP13.05□□□□□ -0.32
HERC3-203ENST00000407637 BPIFB6Q8NFQ5 453 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 OR13F1Q8NGS4 319 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 FEM1CQ96JP0 617 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 NACC1Q96RE7 527 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 RAD21L1Q9H4I0 556 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 CNGB3Q9NQW8 809 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 MOSPD1Q9UJG1 213 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 CDY2AQ9Y6F7 541 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
HERC3-203ENST00000407637 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 TRDMT1O14717 391 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 ALDOAP04075 364 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 GNA15P30679 374 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 POLR2IP36954 125 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 PTPN9P43378 593 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 CLK3P49761 638 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 NME5P56597 212 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 GSTO1P78417 241 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 RHDQ02161 417 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 RALGDSQ12967 914 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 MAPK11Q15759 364 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 TTC23LQ6PF05 361 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 AKAP14Q86UN6 197 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 CBR4Q8N4T8 237 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 MINDY2Q8NBR6 621 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 PDPRQ8NCN5 879 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 CYGBQ8WWM9 190 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 CNDP1Q96KN2 507 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 CSF3RQ99062 836 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 WDR18Q9BV38 432 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 GDAP2Q9NXN4 497 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 COPG2Q9UBF2 871 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 TCAF1Q9Y4C2 921 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 ILVBLA1L0T0 632 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 FAM159BA6NKW6 160 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 IL18RAPO95256 599 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 TMBIM6P55061 237 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 ATP6V0D1P61421 351 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 MAPRE1Q15691 268 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 SMAD1Q15797 465 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 DNAJC24Q6P3W2 148 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 NPNTQ6UXI9 565 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 RFX6Q8HWS3 928 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 GALNT13Q8IUC8 556 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms