RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 MRPL40Q9NQ50 206 aaKnown RBP14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 SMIM35A0A1B0GVV1 85 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 RHOBTB1O94844 696 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 TUBP50607 506 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 CA9Q16790 459 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 TMEM63BQ5T3F8 832 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 C9orf57Q5W0N0 161 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 ZDHHC14Q8IZN3 488 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 CDRT15Q96T59 188 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 LRCH1Q9Y2L9 728 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 C5orf60A6NFR6 353 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 ITGA2BP08514 1039 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 SLCO2A1Q92959 643 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 CSPG4P5Q96PW8 444 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 TRIM15Q9C019 465 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 ZC3H4Q9UPT8 1303 aaKnown RBP14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 COL4A5P29400 1685 aa14.97□□□□□ -0.01
SFMBT1-201ENST00000394752 FBXO21O94952 628 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 PTK2BQ14289 1009 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 PARP6Q2NL67 630 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 ZNF792Q3KQV3 632 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 FUT11Q495W5 492 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 PPM1JQ5JR12 505 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 KYAT3Q6YP21 454 aaKnown RBP14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 CLEC4CQ8WTT0 213 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 DPEP3Q9H4B8 488 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 TRPC7Q9HCX4 862 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 SYBUQ9NX95 663 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 CCDC167Q9P0B6 97 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 EME2A4GXA9 379 aaPredicted RBP14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 POU5F1Q01860 360 aaKnown RBP14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 SNX17Q15036 470 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 ZRANB3Q5FWF4 1079 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 TMC7Q7Z402 723 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 PBXIP1Q96AQ6 731 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 HSFY1Q96LI6 401 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 NFKBIZQ9BYH8 718 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 PIF1Q9H611 641 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 PNPOQ9NVS9 261 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 SIX4Q9UIU6 781 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 EFR3BQ9Y2G0 817 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 LTBP1Q14766 1721 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 UGT1A9O60656 530 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 KPNA6O60684 536 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 DDHD2O94830 711 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 EDN1P05305 212 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 APOA4P06727 396 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 FAM187BQ17R55 369 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 PCYOX1LQ8NBM8 494 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 ZSCAN18Q8TBC5 510 aaPredicted RBP14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 SEC14L1Q92503 715 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 SERAC1Q96JX3 654 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 MUC3BQ9H195 1237 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 UGT1A7Q9HAW7 530 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 UGT1A10Q9HAW8 530 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 UGT1A8Q9HAW9 530 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 CD274Q9NZQ7 290 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 LGALS13Q9UHV8 139 aa14.96□□□□□ -0.01
SFMBT1-201ENST00000394752 FOCADQ5VW36 1801 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 TSPAN8P19075 237 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 CTBP1Q13363 440 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 SPDYAQ5MJ70 313 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 PCDH19Q8TAB3 1148 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 CXorf38Q8TB03 319 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 DIS3LQ8TF46 1054 aaKnown RBP14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 FBXO32Q969P5 355 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 DENND2DQ9H6A0 471 aaPredicted RBP14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 GEMIN8Q9NWZ8 242 aaKnown RBP14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 CRYL1Q9Y2S2 319 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 SLC30A1Q9Y6M5 507 aa14.96□□□□□ -0.02
SFMBT1-201ENST00000394752 SMCHD1A6NHR9 2005 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 IGKV6-21A0A0C4DH24 114 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 PRPF4O43172 522 aaKnown RBP eCLIP14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 EPHA3P29320 983 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 GRIA1P42261 906 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 ZNF132P52740 706 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 MRPS22P82650 360 aaKnown RBP14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 ADGRD1Q6QNK2 874 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 CYP2R1Q6VVX0 501 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 C10orf107Q8IVU9 208 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 KYQ8NBH2 561 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 CYGBQ8WWM9 190 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 FAXDC2Q96IV6 333 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 ORC6Q9Y5N6 252 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 SMIM28A0A1B0GU29 152 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 SLC12A8A0AV02 714 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 TREHO43280 583 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 SRP72O76094 671 aaKnown RBP14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 ZBTB48P10074 688 aaPredicted RBP14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 RAG1P15918 1043 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 MSS51Q4VC12 460 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 GRTP1Q5TC63 336 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 SETD3Q86TU7 594 aaPredicted RBP14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 PSTKQ8IV42 348 aaKnown RBP14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 DCP1BQ8IZD4 617 aaKnown RBP14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 SLC35B2Q8TB61 432 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 UPF1Q92900 1129 aaKnown RBP eCLIP14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 CNDP1Q96KN2 507 aa14.95□□□□□ -0.02
SFMBT1-201ENST00000394752 CPNE1Q99829 537 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms