RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PGFP49763 221 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 NOGQ13253 232 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 PPP2R5DQ14738 602 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 NOMO2Q5JPE7 1267 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 BTBD8Q5XKL5 378 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 ARHGAP12Q8IWW6 846 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 SLC43A3Q8NBI5 491 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 RNF34Q969K3 372 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 GLT1D1Q96MS3 346 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 FCRL3Q96P31 734 aaPredicted RBP9.26□□□□□ -0.93
TDP1-202ENST00000393452 AGAP3Q96P47 875 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 MECRQ9BV79 373 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 ZCWPW1Q9H0M4 648 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 LRMDAQ9H2I8 198 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 SLC17A6Q9P2U8 582 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 NUMBLQ9Y6R0 609 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.25□□□□□ -0.93
TDP1-202ENST00000393452 FAM237BA0A1B0GVD1 139 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 TRAFD1O14545 582 aaPredicted RBP9.25□□□□□ -0.93
TDP1-202ENST00000393452 FGF10O15520 208 aaPredicted RBP9.25□□□□□ -0.93
TDP1-202ENST00000393452 USP12O75317 370 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 USP1O94782 785 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 GSRP00390 522 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 BPGMP07738 259 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 ITGA2BP08514 1039 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 NFKB1P19838 968 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 CCNCP24863 283 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 CCR1P32246 355 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 GRIK1P39086 918 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 GP5P40197 560 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 COG7P83436 770 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 OCRLQ01968 901 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
TDP1-202ENST00000393452 SNCBQ16143 134 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 CTC1Q2NKJ3 1217 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 CES4AQ5XG92 561 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 CLNKQ7Z7G1 428 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 LZTR1Q8N653 840 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 CNTD1Q8N815 330 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 MAGEC3Q8TD91 643 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 CASP10Q92851 521 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 ISL2Q96A47 359 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 E2F7Q96AV8 911 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 FUBP3Q96I24 572 aaKnown RBP eCLIP9.25□□□□□ -0.93
TDP1-202ENST00000393452 CPNE1Q99829 537 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 TSEN34Q9BSV6 310 aaKnown RBP9.25□□□□□ -0.93
TDP1-202ENST00000393452 TRPV6Q9H1D0 765 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 TBC1D13Q9NVG8 400 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 ZFATQ9P243 1243 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 DCTN4Q9UJW0 460 aa9.25□□□□□ -0.93
TDP1-202ENST00000393452 MAGEB16A2A368 324 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 ARHGAP42A6NI28 874 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 KCNU1A8MYU2 1149 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 DNAJC6O75061 913 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SNNO75324 88 aaPredicted RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 JCHAINP01591 159 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 OR4Q2P0C623 313 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 ERVK-10P10266 1014 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 DNAJB2P25686 324 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 MAGEA12P43365 314 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 NPY2RP49146 381 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 BST1Q10588 318 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 PDE1CQ14123 709 aaPredicted RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 ANKRD20A4Q4UJ75 823 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SLC39A12Q504Y0 691 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 ATG16L1Q676U5 607 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 CES3Q6UWW8 571 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 KIF2BQ8N4N8 673 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
TDP1-202ENST00000393452 INPP5DQ92835 1189 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SLC7A6OSQ96CW6 309 aaPredicted RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 CELF6Q96J87 481 aaKnown RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 TMEM237Q96Q45 408 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 IL22Q9GZX6 179 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 NMUR1Q9HB89 426 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SAR1AQ9NR31 198 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SFMBT1Q9UHJ3 866 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 EMCNQ9ULC0 261 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 TRIM33Q9UPN9 1127 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SCML2Q9UQR0 700 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 MTO1Q9Y2Z2 717 aaKnown RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 NYNRINQ9P2P1 1898 aaKnown RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 HTTP42858 3142 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 A0A0G2JND7 137 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 AP3B1O00203 1094 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 TPP1O14773 563 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 PSMD3O43242 534 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 MSI1O43347 362 aaKnown RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 MAFKO60675 156 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 GLRA3O75311 464 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 ATP6V1G2O95670 118 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 TOP3BO95985 862 aaKnown RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 KRT16P08779 473 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 SRGAP2BP0DMP2 458 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 NEFHP12036 1026 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 ARFIP2P53365 341 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 CDK18Q07002 472 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 CHI3L2Q15782 390 aa9.24□□□□□ -0.93
TDP1-202ENST00000393452 NFE2Q16621 373 aaPredicted RBP9.24□□□□□ -0.93
TDP1-202ENST00000393452 INSCQ1MX18 579 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms