RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 LATO43561 262 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 LDOC1O95751 146 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 ADH1BP00325 375 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 IL1BP01584 269 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 IGLV3-25P01717 112 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 APOEP02649 317 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 MZF1P28698 734 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 EPHA8P29322 1005 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 DRD3P35462 400 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 ACADVLP49748 655 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 METAP1P53582 386 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 NXPH1P58417 271 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 PPP2CBP62714 309 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 PPP2CAP67775 309 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 CETN1Q12798 172 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 ELAVL3Q14576 367 aaKnown RBP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 RNF219Q5W0B1 726 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 ISM2Q6H9L7 571 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 TTI2Q6NXR4 508 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 DENND1BQ6P3S1 775 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 SND1Q7KZF4 910 aaKnown RBP eCLIP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 CHSY1Q86X52 802 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 EID2Q8N6I1 236 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 TSC1Q92574 1164 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 FAM131CQ96AQ9 280 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 DHTKD1Q96HY7 919 aaPredicted RBP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 BTN2A3PQ96KV6 586 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 SLC4A5Q9BY07 1137 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 GTPBP4Q9BZE4 634 aaKnown RBP14.24□□□□□ -0.13
CXCL12-202ENST00000374426 TJP2Q9UDY2 1190 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 CYTH4Q9UIA0 394 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 CNTN6Q9UQ52 1028 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3DA0A087WVF3 549 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3IA0A087WXS9 549 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3EA0A087X179 549 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3KA0A087X1G2 549 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3FA6NER0 549 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3LB9A6J9 549 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 E5RJQ4 531 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 CAPN9O14815 690 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 YKT6O15498 198 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 RFPL3O75679 317 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TRUB2O95900 331 aaKnown RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 C1SP09871 688 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3HP0C7X1 549 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 JUPP14923 745 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 ACADSBP45954 432 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 ARRB1P49407 418 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 BNIP3Q12983 259 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 EIF4EBP2Q13542 120 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 STIM1Q13586 685 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 SFMBT2Q5VUG0 894 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3GQ6DHY5 549 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3CQ6IPX1 549 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 CIR1Q86X95 450 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 SPATS2Q86XZ4 545 aaKnown RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TBC1D3Q8IZP1 549 aaPredicted RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 EHBP1Q8NDI1 1231 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 STK32AQ8WU08 396 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 FRS2Q8WU20 508 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 NXPE2Q96DL1 559 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 DCBLD2Q96PD2 775 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 PRMT1Q99873 361 aaKnown RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TRIM62Q9BVG3 475 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 ERVMER34-1Q9H9K5 563 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 POPDC2Q9HBU9 364 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 ARHGAP20Q9P2F6 1191 aa14.23□□□□□ -0.13
CXCL12-202ENST00000374426 TPX2Q9ULW0 747 aaKnown RBP14.23□□□□□ -0.13
CXCL12-202ENST00000374426 KCNU1A8MYU2 1149 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 F5H5T6 163 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 CDK4P11802 303 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 PDGFRAP16234 1089 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 BMP6P22004 513 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 HNF1BP35680 557 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 RXRGP48443 463 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 PLK1P53350 603 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 YWHAZP63104 245 aaKnown RBP14.22□□□□□ -0.13
CXCL12-202ENST00000374426 TARDBPQ13148 414 aaKnown RBP eCLIP14.22□□□□□ -0.13
CXCL12-202ENST00000374426 SLC12A1Q13621 1099 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 TAF5Q15542 800 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 MEA1Q16626 185 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 NAPEPLDQ6IQ20 393 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 KLHL10Q6JEL2 608 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 CXorf57Q6NSI4 855 aaKnown RBP14.22□□□□□ -0.13
CXCL12-202ENST00000374426 FBXL19Q6PCT2 694 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.22□□□□□ -0.13
CXCL12-202ENST00000374426 KANSL1Q7Z3B3 1105 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 TMEM110Q86TL2 294 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 CCAR2Q8N163 923 aaKnown RBP14.22□□□□□ -0.13
CXCL12-202ENST00000374426 SPAG5Q96R06 1193 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 MAN1B1Q9UKM7 699 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 SARDHQ9UL12 918 aa14.22□□□□□ -0.13
CXCL12-202ENST00000374426 NYNRINQ9P2P1 1898 aaKnown RBP14.22□□□□□ -0.13
CXCL12-202ENST00000374426 GOLGA6L4A6NEF3 574 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 RTN2O75298 545 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 LETM1O95202 739 aaPredicted RBP14.21□□□□□ -0.13
CXCL12-202ENST00000374426 KRT5P13647 590 aa14.21□□□□□ -0.13
CXCL12-202ENST00000374426 ITPKBP27987 946 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms