RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 PCDHGC3Q9UN70 934 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 BTBD3Q9Y2F9 522 aa20.04■□□□□ 0.8
ITGA4-202ENST00000339307 A0A1B0GVM2 712 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 GTPBP10A4D1E9 387 aaKnown RBP20.03■□□□□ 0.8
ITGA4-202ENST00000339307 TCAF2A6NFQ2 919 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 SRRM3A6NNA2 597 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-202ENST00000339307 H0Y8X5 98 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 M0QYT0 321 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 FOXN3O00409 490 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-202ENST00000339307 BNIP3LO60238 219 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 VAV1P15498 845 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 GGCXP38435 758 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 CCT8P50990 548 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 CENPCQ03188 943 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 SULT2A1Q06520 285 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 SLC12A1Q13621 1099 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 KCNT1Q5JUK3 1230 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 TTC39BQ5VTQ0 682 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-202ENST00000339307 FBXL22Q6P050 247 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-202ENST00000339307 IRF2BP1Q8IU81 584 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 FAM114A1Q8IWE2 563 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 OR2T34Q8NGX1 318 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 PTPRN2Q92932 1015 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 IGSF8Q969P0 613 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 PPP1R9BQ96SB3 815 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 FAM129BQ96TA1 746 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 PRMT1Q99873 361 aaKnown RBP20.03■□□□□ 0.8
ITGA4-202ENST00000339307 ASNSD1Q9NWL6 643 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 SLC25A13Q9UJS0 675 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 AJAP1Q9UKB5 411 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-202ENST00000339307 PCDHGB2Q9Y5G2 931 aa20.03■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3DA0A087WVF3 549 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3IA0A087WXS9 549 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3EA0A087X179 549 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3KA0A087X1G2 549 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.02■□□□□ 0.8
ITGA4-202ENST00000339307 A0A1W2PPC4 97 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3FA6NER0 549 aaPredicted RBP20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3LB9A6J9 549 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 ADH1BP00325 375 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 ATXN1LP0C7T5 689 aaKnown RBP20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3HP0C7X1 549 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 C7P10643 843 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 GOT1P17174 413 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 C5AR1P21730 350 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 OXCT1P55809 520 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 RACK1P63244 317 aaKnown RBP20.02■□□□□ 0.8
ITGA4-202ENST00000339307 SLC6A3Q01959 620 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 ZNF177Q13360 481 aaPredicted RBP20.02■□□□□ 0.8
ITGA4-202ENST00000339307 AUHQ13825 339 aaKnown RBP20.02■□□□□ 0.8
ITGA4-202ENST00000339307 RAPGEF1Q13905 1077 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 ARID5BQ14865 1188 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 MAN2A1Q16706 1144 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 PRAMEF14Q5SWL7 426 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3GQ6DHY5 549 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3CQ6IPX1 549 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 TBC1D3Q8IZP1 549 aaPredicted RBP20.02■□□□□ 0.8
ITGA4-202ENST00000339307 AADATQ8N5Z0 425 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 FZD4Q9ULV1 537 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 ITIH6Q6UXX5 1313 aa20.02■□□□□ 0.8
ITGA4-202ENST00000339307 ZNF18P17022 549 aa20.02■□□□□ 0.79
ITGA4-202ENST00000339307 ELAVL3Q14576 367 aaKnown RBP20.02■□□□□ 0.79
ITGA4-202ENST00000339307 OLFML1Q6UWY5 402 aa20.02■□□□□ 0.79
ITGA4-202ENST00000339307 GLRX5Q86SX6 157 aa20.02■□□□□ 0.79
ITGA4-202ENST00000339307 MUC3BQ9H195 1237 aa20.02■□□□□ 0.79
ITGA4-202ENST00000339307 SIX2Q9NPC8 291 aa20.02■□□□□ 0.79
ITGA4-202ENST00000339307 VPS28Q9UK41 221 aa20.02■□□□□ 0.79
ITGA4-202ENST00000339307 HS3ST4Q9Y661 456 aa20.02■□□□□ 0.79
ITGA4-202ENST00000339307 TMEM131Q92545 1883 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 FAM221BA6H8Z2 402 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 PLK4O00444 970 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 PAGE1O75459 146 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 DAB1O75553 588 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 NOS2P35228 1153 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 CLCN1P35523 988 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 CTSKP43235 329 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 GRK6P43250 576 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 BPIFB4P59827 614 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 SCAPQ12770 1279 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 EIF4EBP2Q13542 120 aaPredicted RBP20.01■□□□□ 0.79
ITGA4-202ENST00000339307 POM121L1PQ3SYA9 428 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 PTPN20Q4JDL3 420 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 VWA3BQ502W6 1294 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 SERAC1Q96JX3 654 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 ORAI3Q9BRQ5 295 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 NDST4Q9H3R1 872 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 EBF2Q9HAK2 575 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 ADAMTS1Q9UHI8 967 aa20.01■□□□□ 0.79
ITGA4-202ENST00000339307 VILLO15195 856 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 CD38P28907 300 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 SULT1E1P49888 294 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 IRAK1P51617 712 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 ADPRHP54922 357 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 MTA1Q13330 715 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 INAVAQ3KP66 663 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 TAF3Q5VWG9 929 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 CXorf57Q6NSI4 855 aaKnown RBP20■□□□□ 0.79
ITGA4-202ENST00000339307 DBX2Q6ZNG2 339 aa20■□□□□ 0.79
ITGA4-202ENST00000339307 DSG4Q86SJ6 1040 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms