RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 OR56A4Q8NGH8 313 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 KCTD14Q9BQ13 255 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 TMEM79Q9BSE2 394 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 IKZF4Q9H2S9 585 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 ERVK-5Q9HDB9 667 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 COMMD8Q9NX08 183 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 RAD51BO15315 384 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 ARIH2O95376 493 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 TNFAIP8O95379 198 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 SERPINH1P50454 418 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 WSCD1Q658N2 575 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 LRRC49Q8IUZ0 686 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 COPS5Q92905 334 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 TINF2Q9BSI4 451 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 MPP6Q9NZW5 540 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 H2AFY2Q9P0M6 372 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 PCDHA11Q9Y5I1 949 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 FAM237BA0A1B0GVD1 139 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 EDF1O60869 148 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 ATP6V1B2P21281 511 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 CLK2P49760 499 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 SLC20A2Q08357 652 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 XRCC4Q13426 336 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 FSCN1Q16658 493 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 FAM98BQ52LJ0 330 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 B3GALNT2Q8NCR0 500 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 DPY30Q9C005 99 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 POLR1EQ9GZS1 481 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 STN1Q9H668 368 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 EPS8L2Q9H6S3 715 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 SLCO1B3Q9NPD5 702 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 SELENONQ9NZV5 590 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 CCDC167Q9P0B6 97 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 MORF4L1Q9UBU8 362 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 CLUHO75153 1309 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 MEI4A8MW99 385 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 DCDC2CA8MYV0 355 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 BIRC5O15392 142 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 B4GALT4O60513 344 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 KRT8P05787 483 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 ALOX15P16050 662 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 ANXA11P50995 505 aaKnown RBP17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 EPHB3P54753 998 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 HELQQ8TDG4 1101 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 LENG9Q96B70 501 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 SALL4Q9UJQ4 1053 aa17.4■□□□□ 0.38
TRAPPC11-201ENST00000334690 TCRBV9S1A1TA0A576 114 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 MGAT4DA6NG13 374 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 IRF6O14896 467 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 CCNE2O96020 404 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 KCNJ2P63252 427 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 MIER2Q8N344 545 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 METTL6Q8TCB7 284 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 FNIP1Q8TF40 1166 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 PWWP2AQ96N64 755 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 STARD7Q9NQZ5 370 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 SLC25A13Q9UJS0 675 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 MANSC4A6NHS7 340 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 INPP4BO15327 924 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 LDLRP01130 860 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 PAX3P23760 479 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 FLT3P36888 993 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 JAM2P57087 298 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 PREPLQ4J6C6 727 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 DEPDC1Q5TB30 811 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 PIWIL4Q7Z3Z4 852 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 FAM126BQ8IXS8 530 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 RNF148Q8N7C7 305 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 DIS3LQ8TF46 1054 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 PRCCQ92733 491 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 ACOX2Q99424 681 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 ZCWPW1Q9H0M4 648 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 RABGEF1Q9UJ41 708 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 PAIP2BQ9ULR5 123 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 SERPINB1P30740 379 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 CNTN1Q12860 1018 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 UBR1Q8IWV7 1749 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 NKD2Q969F2 451 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 MAML3Q96JK9 1138 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 TMEM109Q9BVC6 243 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 ARHGAP28Q9P2N2 729 aa17.39■□□□□ 0.37
TRAPPC11-201ENST00000334690 MATKP42679 507 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 RAP1GDS1P52306 607 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 PTP4A2Q12974 167 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 FAM171A1Q5VUB5 890 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 PTF1AQ7RTS3 328 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 USP6NLQ92738 828 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 SAC3D1A6NKF1 404 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 IFNA14P01570 189 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 FNDC5Q8NAU1 212 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 RMND5BQ96G75 393 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 ZFRQ96KR1 1074 aaKnown RBP17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 CDH9Q9ULB4 789 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 SYNCRIPO60506 623 aaKnown RBP17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 SLC2A4P14672 509 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 ATP5F1P24539 256 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 GRM5P41594 1212 aa17.38■□□□□ 0.37
TRAPPC11-201ENST00000334690 PLK1P53350 603 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms