RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 CAND1Q86VP6 1230 aaKnown RBP18.72■□□□□ 0.59
SHISA3-201ENST00000319234 RNF34Q969K3 372 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 SKA1Q96BD8 255 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 EPAS1Q99814 870 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 HEY2Q9UBP5 337 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 PCDHB5Q9Y5E4 795 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 A0A0G2JND7 137 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 OR6C75A6NL08 312 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 TRIM49D1C9J1S8 452 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 APOEP02649 317 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 NEFHP12036 1026 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 EPHB2P29323 1055 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 CYP2C18P33260 490 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 FDFT1P37268 417 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 MAGEA3P43357 314 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 OVGP1Q12889 678 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 SEMA5AQ13591 1074 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 SCD5Q86SK9 330 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 PRPF39Q86UA1 669 aaKnown RBP18.72■□□□□ 0.59
SHISA3-201ENST00000319234 NPAS4Q8IUM7 802 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 CRIPAKQ8N1N5 446 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 PPM1NQ8N819 430 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 TTC17Q96AE7 1141 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 P2RY11Q96G91 374 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 SRPK1Q96SB4 655 aaKnown RBP18.72■□□□□ 0.59
SHISA3-201ENST00000319234 OSBPL2Q9H1P3 480 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 C12orf65Q9H3J6 166 aaKnown RBP18.72■□□□□ 0.59
SHISA3-201ENST00000319234 PRDM12Q9H4Q4 367 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 KCNK13Q9HB14 408 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 OR12D3Q9UGF7 316 aa18.72■□□□□ 0.59
SHISA3-201ENST00000319234 IRAK2O43187 625 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 AVILO75366 819 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 DLDP09622 509 aaKnown RBP18.71■□□□□ 0.59
SHISA3-201ENST00000319234 CCL5P13501 91 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 GNAZP19086 355 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 FGFR3P22607 806 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 MAGEA11P43364 429 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 SLC11A1P49279 550 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 CDK18Q07002 472 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 ZNF280DQ6N043 979 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 CTAGE3PQ8IX95 158 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 NUP93Q8N1F7 819 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 CCNYQ8ND76 341 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 RAB3IL1Q8TBN0 382 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 PTCD3Q96EY7 689 aaKnown RBP18.71■□□□□ 0.59
SHISA3-201ENST00000319234 NSL1Q96IY1 281 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 C7orf26Q96N11 449 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 TMEM120AQ9BXJ8 343 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 GPR62Q9BZJ7 368 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 RNF208Q9H0X6 261 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 MARCH5Q9NX47 278 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 ARHGEF38Q9NXL2 777 aa18.71■□□□□ 0.59
SHISA3-201ENST00000319234 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.7■□□□□ 0.58
SHISA3-201ENST00000319234 NCAM2O15394 837 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 OPHN1O60890 802 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 KRT38O76015 456 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 CXCL10P02778 98 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 BGNP21810 368 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 SERPINB9P50453 376 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 BRMS1LQ5PSV4 323 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 NETO2Q8NC67 525 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 SCLYQ96I15 445 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 ZNF570Q96NI8 536 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 TMEM175Q9BSA9 504 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 BTBD10Q9BSF8 475 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 MRPL9Q9BYD2 267 aaKnown RBP18.7■□□□□ 0.58
SHISA3-201ENST00000319234 SMOC2Q9H3U7 446 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 SCML2Q9UQR0 700 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 PLLPQ9Y342 182 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 SNX10Q9Y5X0 201 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 NR2E3Q9Y5X4 410 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 RNF103O00237 685 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 LUC7L3O95232 432 aaKnown RBP18.7■□□□□ 0.58
SHISA3-201ENST00000319234 PARNO95453 639 aaKnown RBP18.7■□□□□ 0.58
SHISA3-201ENST00000319234 ATG16L1Q676U5 607 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 DENND5BQ6ZUT9 1274 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 CYS1Q717R9 158 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 ANKRD33Q7Z3H0 272 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.7■□□□□ 0.58
SHISA3-201ENST00000319234 COLGALT1Q8NBJ5 622 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 GSDMBQ8TAX9 411 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 BRD8Q9H0E9 1235 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 FBXO44Q9H4M3 255 aa18.7■□□□□ 0.58
SHISA3-201ENST00000319234 XAB2Q9HCS7 855 aaKnown RBP18.7■□□□□ 0.58
SHISA3-201ENST00000319234 A0A1W2PQH9 124 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 LRIG2O94898 1065 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 ATP5BP06576 529 aaKnown RBP18.69■□□□□ 0.58
SHISA3-201ENST00000319234 TPBGLP0DKB5 382 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 PGFP49763 221 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 ZBTB16Q05516 673 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 WASHC5Q12768 1159 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 ELAVL2Q12926 359 aaKnown RBP18.69■□□□□ 0.58
SHISA3-201ENST00000319234 DBN1Q16643 649 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 DDR2Q16832 855 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 CMPK2Q5EBM0 449 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 FUT10Q6P4F1 479 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 NUDCD1Q96RS6 583 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 HAPLN3Q96S86 360 aa18.69■□□□□ 0.58
SHISA3-201ENST00000319234 EBNA1BP2Q99848 306 aaKnown RBP18.69■□□□□ 0.58
SHISA3-201ENST00000319234 HIPK3Q9H422 1215 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms