RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 C1orf186Q6ZWK4 172 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 ARPINQ7Z6K5 226 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 DEFB106AQ8N104 65 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 FITM2Q8N6M3 262 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 SPPL2AQ8TCT8 520 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 SLC25A23Q9BV35 468 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 ETNK2Q9NVF9 386 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 TBC1D13Q9NVG8 400 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 C6orf203Q9P0P8 240 aaPredicted RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 LMTK2Q8IWU2 1503 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 CBX4O00257 560 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 STK25O00506 426 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 SYNCRIPO60506 623 aaKnown RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 CRABP2P29373 138 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 NAA20P61599 178 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 POLD3Q15054 466 aaPredicted RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 MAP4K3Q8IVH8 894 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 HAS1Q92839 578 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 PARK7Q99497 189 aaKnown RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 DGCR6LQ9BY27 220 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 CCL15-CCL14A0A0B4J2E2 113 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 CCDC154A6NI56 674 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 LIASO43766 372 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 PBX1P40424 430 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 CCL15Q16663 113 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 C15orf59Q2T9L4 293 aaPredicted RBP16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 EML3Q32P44 896 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 PERM1Q5SV97 790 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 ITGA11Q9UKX5 1188 aa16.76■□□□□ 0.27
SH3RF1-201ENST00000284637 THPOP40225 353 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 NR2C2P49116 596 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 PRMT9Q6P2P2 845 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 TTC7BQ86TV6 843 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 CDHR5Q9HBB8 845 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 CHKBQ9Y259 395 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 ZC3H13Q5T200 1668 aaKnown RBP16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 ASTN1O14525 1302 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 CHD1O14646 1710 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 GSC2O15499 205 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 EDF1O60869 148 aaKnown RBP16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 LTFP02788 710 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 RPL22P35268 128 aaKnown RBP16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 NPY2RP49146 381 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 TYW3Q6IPR3 259 aaKnown RBP16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 BRSK2Q8IWQ3 736 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 KBTBD2Q8IY47 623 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 FAM9CQ8IZT9 166 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 EID3Q8N140 333 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 FBXW8Q8N3Y1 598 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 TRAPPC12Q8WVT3 735 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 C9orf16Q9BUW7 83 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 HOXD10P28358 340 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 LRPAP1P30533 357 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 LY6KQ17RY6 165 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 ULK2Q8IYT8 1036 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 METTL6Q8TCB7 284 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 LRRC19Q9H756 370 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 DDX43Q9NXZ2 648 aaKnown RBP16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 AP4B1Q9Y6B7 739 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 SNTNA6NMZ2 147 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 CYP1A2P05177 515 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 CENPAP49450 140 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 ANKS6Q68DC2 871 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 STYK1Q6J9G0 422 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 FAM45BPQ6NSW5 357 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 METTL7BQ6UX53 244 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 SLC7A5P2Q9GIP4 190 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 RIBC2Q9H4K1 309 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 DENND2DQ9H6A0 471 aaPredicted RBP16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 CARD8Q9Y2G2 431 aa16.75■□□□□ 0.27
SH3RF1-201ENST00000284637 NBNO60934 754 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 RAB15P59190 212 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 FAM228AQ86W67 206 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 CHID1Q9BWS9 393 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 FBXO6Q9NRD1 293 aaPredicted RBP16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 RAD51BO15315 384 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 PAEPP09466 180 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 AKAP5P24588 427 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 PRKAA2P54646 552 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 SLC6A3Q01959 620 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 UBAP2LQ14157 1087 aaKnown RBP16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 VPS72Q15906 364 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 DDR2Q16832 855 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 CARNMT1Q8N4J0 409 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 RSPH1Q8WYR4 309 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 PLA2G4CQ9UP65 541 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 IPPQ9Y573 584 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 THP07101 528 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 INSRRP14616 1297 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 HNRNPH3P31942 346 aaKnown RBP16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 CPT1AP50416 773 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 DGCR6Q14129 220 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 LPCAT1Q8NF37 534 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 RAET1EQ8TD07 263 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 PNPLA3Q9NST1 481 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 VPS28Q9UK41 221 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 C5orf60A6NFR6 353 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms