RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Shcbp1Q9Z179 668 aa11.66□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Pdpk1Q9Z2A0 559 aa11.66□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Gm13212B1ASQ7 799 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Tbc1d2B1AVH7 922 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Tnfrsf25B1AWN9 411 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Gm21969J3QJZ1 289 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 UgcgO88693 394 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Hoxa9P09631 271 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Tm6sf1P58749 370 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Cntn5P68500 1098 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Msx2Q03358 267 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Vwa5b2Q3UR50 1248 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Myl10Q62082 202 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Plppr4Q7TME0 766 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Ccp110Q7TSH4 1004 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Tbc1d22bQ80VE5 505 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Dbr1Q923B1 550 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 NgrnQ99KS2 293 aaKnown RBP11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Ddah2Q99LD8 285 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 NckipsdQ9ESJ4 714 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Scamp4Q9JKV5 230 aa11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Rad18Q9QXK2 509 aaKnown RBP11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Zranb2Q9R020 330 aaKnown RBP11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Trip12G5E870 2025 aaKnown RBP11.65□□□□□ -0.54
Hmgb1-202ENSMUST00000093196 Vmn2r121A2BE32 847 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Tatdn2B7ZNL9 783 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Adgrf2E9Q4J9 644 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 SparcP07214 302 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Serpinh1P19324 417 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Aimp1P31230 310 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Usp10P52479 792 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Kcnma1Q08460 1209 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 HelqQ2VPA6 1069 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Krt9Q6RHW0 743 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Ip6k2Q80V72 448 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 P2ry10Q8BFU7 328 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Anks1bQ8BIZ1 1259 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Epc1Q8C9X6 813 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Cacnb2Q8CC27 655 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 LgsnQ8CIX8 563 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Gimap7Q8R379 293 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Mlc1Q8VHK5 382 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Mat1aQ91X83 396 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 HnrnpllQ921F4 591 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Prc1Q99K43 603 aaKnown RBP11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Lonp2Q9DBN5 852 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Phc2Q9QWH1 850 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Myo16Q5DU14 1919 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Tenm3Q9WTS6 2715 aa11.64□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Wnk1P83741 2377 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Myo10F8VQB6 2062 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 CitP49025 2055 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Vmn2r27D3YUK6 857 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Zscan29E9Q5B4 869 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Dusp8O09112 663 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Pth1rP41593 591 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 PklrP53657 574 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 AdkP55264 361 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Usp25P57080 1055 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Lefty2P57785 368 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Ppp3caP63328 521 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Kif20aP97329 887 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Asprv1Q09PK2 339 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 DeptorQ570Y9 409 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Tbr1Q64336 681 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 AktipQ64362 292 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Gstt1Q64471 240 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 ParpbpQ6IRT3 573 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Ric8bQ80XE1 520 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Spem2Q8C5U4 503 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Spata32Q8C5V0 334 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Znf628Q8CJ78 1038 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Cadm4Q8R464 388 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Uroc1Q8VC12 676 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Upb1Q8VC97 393 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Q91WD4 421 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Adi1Q99JT9 179 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Psma8Q9CWH6 250 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Csnk1eQ9JMK2 416 aaKnown RBP11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Znf106O88466 1888 aa11.63□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Sdk1Q3UH53 2193 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 RttnQ8R4Y8 2226 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Ighv11-2A0A075B5R8 117 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Adam6aB2RSY5 754 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Mknk1O08605 427 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Brcc3P46737 291 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Mcm4P49717 862 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Aup1P70295 410 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Krt80Q0VBK2 452 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Emc10Q3TAS6 258 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Zbtb16Q3UQ17 673 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Zzz3Q6KAQ7 910 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Dnajc8Q6NZB0 253 aaKnown RBP11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 GnsQ8BFR4 544 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Syn3Q8JZP2 579 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Znf445Q8R2V3 986 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Olfr348Q8VGK3 313 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 Bmp2kQ91Z96 1138 aa11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 DarsQ922B2 501 aaKnown RBP11.62□□□□□ -0.55
Hmgb1-202ENSMUST00000093196 BrapQ99MP8 591 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms