RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
PHGDH-212ENST00000641247 ACIN1Q9UKV3 1341 aaKnown RBP14.64□□□□□ -0.07
PHGDH-212ENST00000641247 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
PHGDH-212ENST00000641247 HIRIP3Q9BW71 556 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-212ENST00000641247 SPON1Q9HCB6 807 aa14.63□□□□□ -0.07
PHGDH-212ENST00000641247 PRDM11Q9NQV5 511 aa14.63□□□□□ -0.07
PHGDH-212ENST00000641247 STRN4Q9NRL3 753 aa14.63□□□□□ -0.07
PHGDH-212ENST00000641247 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
PHGDH-212ENST00000641247 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
PHGDH-212ENST00000641247 NBPF8Q3BBV2 869 aa14.62□□□□□ -0.07
PHGDH-212ENST00000641247 NBPF14Q5TI25 921 aa14.62□□□□□ -0.07
PHGDH-212ENST00000641247 PDGFDQ9GZP0 370 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-212ENST00000641247 PPP1R1BQ9UD71 204 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-212ENST00000641247 COL14A1Q05707 1796 aaKnown RBP14.62□□□□□ -0.07
PHGDH-212ENST00000641247 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
PHGDH-212ENST00000641247 ZNF784Q8NCA9 323 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-212ENST00000641247 TRPM3Q9HCF6 1732 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-212ENST00000641247 ANKARQ7Z5J8 1434 aa14.59□□□□□ -0.07
PHGDH-212ENST00000641247 IFT172Q9UG01 1749 aa14.59□□□□□ -0.07
PHGDH-212ENST00000641247 ZC3H6P61129 1189 aaKnown RBP14.59□□□□□ -0.07
PHGDH-212ENST00000641247 POGKQ9P215 609 aa14.59□□□□□ -0.07
PHGDH-212ENST00000641247 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
PHGDH-212ENST00000641247 NINLQ9Y2I6 1382 aa14.59□□□□□ -0.07
PHGDH-212ENST00000641247 ALS2Q96Q42 1657 aa14.58□□□□□ -0.07
PHGDH-212ENST00000641247 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-212ENST00000641247 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
PHGDH-212ENST00000641247 NUTM2GQ5VZR2 741 aa14.58□□□□□ -0.08
PHGDH-212ENST00000641247 LARP1Q6PKG0 1096 aaKnown RBP14.58□□□□□ -0.08
PHGDH-212ENST00000641247 BARGINQ6ZT62 677 aa14.58□□□□□ -0.08
PHGDH-212ENST00000641247 PTF1AQ7RTS3 328 aa14.58□□□□□ -0.08
PHGDH-212ENST00000641247 ANO8Q9HCE9 1232 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-212ENST00000641247 CAMTA1Q9Y6Y1 1673 aa14.58□□□□□ -0.08
PHGDH-212ENST00000641247 GPRASP1Q5JY77 1395 aa14.58□□□□□ -0.08
PHGDH-212ENST00000641247 ADGRB2O60241 1585 aa14.57□□□□□ -0.08
PHGDH-212ENST00000641247 RREB1Q92766 1687 aa14.57□□□□□ -0.08
PHGDH-212ENST00000641247 NUP188Q5SRE5 1749 aa14.57□□□□□ -0.08
PHGDH-212ENST00000641247 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
PHGDH-212ENST00000641247 MPHOSPH9Q99550 1183 aa14.56□□□□□ -0.08
PHGDH-212ENST00000641247 MINK1Q8N4C8 1332 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-212ENST00000641247 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
PHGDH-212ENST00000641247 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
PHGDH-212ENST00000641247 WASLO00401 505 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-212ENST00000641247 PTGER2P43116 358 aa14.55□□□□□ -0.08
PHGDH-212ENST00000641247 PROM2Q8N271 834 aa14.55□□□□□ -0.08
PHGDH-212ENST00000641247 TRAK1Q9UPV9 953 aa14.55□□□□□ -0.08
PHGDH-212ENST00000641247 CRYBG1Q9Y4K1 1723 aa14.55□□□□□ -0.08
PHGDH-212ENST00000641247 EVA1CP58658 441 aa14.54□□□□□ -0.08
PHGDH-212ENST00000641247 SSH2Q76I76 1423 aa14.53□□□□□ -0.08
PHGDH-212ENST00000641247 ZBTB7AO95365 584 aa14.53□□□□□ -0.08
PHGDH-212ENST00000641247 IFFO2Q5TF58 517 aa14.53□□□□□ -0.08
PHGDH-212ENST00000641247 TCP11L2Q8N4U5 519 aa14.53□□□□□ -0.08
PHGDH-212ENST00000641247 C1QTNF8P60827 252 aa14.52□□□□□ -0.09
PHGDH-212ENST00000641247 DLC1Q96QB1 1528 aa14.51□□□□□ -0.09
PHGDH-212ENST00000641247 ATF5Q9Y2D1 282 aaPredicted RBP14.51□□□□□ -0.09
PHGDH-212ENST00000641247 SYT17Q9BSW7 474 aa14.5□□□□□ -0.09
PHGDH-212ENST00000641247 ADGRB1O14514 1584 aa14.49□□□□□ -0.09
PHGDH-212ENST00000641247 PLSCR1O15162 318 aa14.49□□□□□ -0.09
PHGDH-212ENST00000641247 NUDT16Q96DE0 195 aaKnown RBP14.49□□□□□ -0.09
PHGDH-212ENST00000641247 TULP4Q9NRJ4 1543 aa14.49□□□□□ -0.09
PHGDH-212ENST00000641247 NRKQ7Z2Y5 1582 aa14.48□□□□□ -0.09
PHGDH-212ENST00000641247 FHDC1Q9C0D6 1143 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-212ENST00000641247 UTRNP46939 3433 aa14.47□□□□□ -0.09
PHGDH-212ENST00000641247 SGIP1Q9BQI5 828 aa14.46□□□□□ -0.09
PHGDH-212ENST00000641247 THRAP3Q9Y2W1 955 aaKnown RBP14.46□□□□□ -0.09
PHGDH-212ENST00000641247 CASZ1Q86V15 1759 aa14.45□□□□□ -0.1
PHGDH-212ENST00000641247 BCL11BQ9C0K0 894 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-212ENST00000641247 ATP7BP35670 1465 aa14.44□□□□□ -0.1
PHGDH-212ENST00000641247 ACEP12821 1306 aa14.44□□□□□ -0.1
PHGDH-212ENST00000641247 CPDO75976 1380 aa14.44□□□□□ -0.1
PHGDH-212ENST00000641247 PHRF1Q9P1Y6 1649 aaKnown RBP14.44□□□□□ -0.1
PHGDH-212ENST00000641247 MYOM1P52179 1685 aa14.43□□□□□ -0.1
PHGDH-212ENST00000641247 ABTB2Q8N961 1025 aa14.43□□□□□ -0.1
PHGDH-212ENST00000641247 MARCH10Q8NA82 808 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-212ENST00000641247 CDK19Q9BWU1 502 aa14.43□□□□□ -0.1
PHGDH-212ENST00000641247 EIF3AQ14152 1382 aaKnown RBP14.43□□□□□ -0.1
PHGDH-212ENST00000641247 USP19O94966 1318 aa14.42□□□□□ -0.1
PHGDH-212ENST00000641247 PEAK1Q9H792 1746 aa14.42□□□□□ -0.1
PHGDH-212ENST00000641247 GCP02774 474 aa14.42□□□□□ -0.1
PHGDH-212ENST00000641247 SLC15A2Q16348 729 aa14.42□□□□□ -0.1
PHGDH-212ENST00000641247 KDM2AQ9Y2K7 1162 aa14.42□□□□□ -0.1
PHGDH-212ENST00000641247 POLR3AO14802 1390 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-212ENST00000641247 LMO7Q8WWI1 1683 aa14.42□□□□□ -0.1
PHGDH-212ENST00000641247 OVOS2A0A0G2JMS6 1433 aa14.41□□□□□ -0.1
PHGDH-212ENST00000641247 OVOS2A0A0J9YW53 1432 aa14.41□□□□□ -0.1
PHGDH-212ENST00000641247 OVOS2Q6IE36 1432 aa14.41□□□□□ -0.1
PHGDH-212ENST00000641247 TXNRD1Q16881 649 aa14.41□□□□□ -0.1
PHGDH-212ENST00000641247 COL5A2P05997 1499 aaPredicted RBP14.41□□□□□ -0.1
PHGDH-212ENST00000641247 PLEKHG3A1L390 1219 aa14.4□□□□□ -0.1
PHGDH-212ENST00000641247 DDB1Q16531 1140 aa14.4□□□□□ -0.1
PHGDH-212ENST00000641247 AXIN2Q9Y2T1 843 aa14.39□□□□□ -0.11
PHGDH-212ENST00000641247 CRB1P82279 1406 aa14.39□□□□□ -0.11
PHGDH-212ENST00000641247 ZBTB7CA1YPR0 619 aa14.38□□□□□ -0.11
PHGDH-212ENST00000641247 C11orf95C9JLR9 678 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-212ENST00000641247 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
PHGDH-212ENST00000641247 STK32BQ9NY57 414 aa14.38□□□□□ -0.11
PHGDH-212ENST00000641247 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
PHGDH-212ENST00000641247 PARP4Q9UKK3 1724 aaKnown RBP14.38□□□□□ -0.11
PHGDH-212ENST00000641247 DCAF11Q8TEB1 546 aa14.36□□□□□ -0.11
PHGDH-212ENST00000641247 ARXQ96QS3 562 aa14.36□□□□□ -0.11
PHGDH-212ENST00000641247 TOM1L2Q6ZVM7 507 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms