RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 TTC21BQ7Z4L5 1316 aa24.34■■□□□ 1.49
PHGDH-209ENST00000641074 C14orf37Q86TY3 774 aa24.33■■□□□ 1.49
PHGDH-209ENST00000641074 CFAP53Q96M91 514 aa24.33■■□□□ 1.49
PHGDH-209ENST00000641074 NGDNQ8NEJ9 315 aaKnown RBP24.32■■□□□ 1.48
PHGDH-209ENST00000641074 SHPRHQ149N8 1683 aa24.32■■□□□ 1.48
PHGDH-209ENST00000641074 SSH2Q76I76 1423 aa24.31■■□□□ 1.48
PHGDH-209ENST00000641074 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
PHGDH-209ENST00000641074 STRCP1A6NGW2 1772 aa24.3■■□□□ 1.48
PHGDH-209ENST00000641074 COG3Q96JB2 828 aa24.29■■□□□ 1.48
PHGDH-209ENST00000641074 FBLN1P23142 703 aa24.28■■□□□ 1.48
PHGDH-209ENST00000641074 SALL2Q9Y467 1007 aaPredicted RBP24.28■■□□□ 1.48
PHGDH-209ENST00000641074 POLKQ9UBT6 870 aa24.26■■□□□ 1.47
PHGDH-209ENST00000641074 COL3A1P02461 1466 aaPredicted RBP24.25■■□□□ 1.47
PHGDH-209ENST00000641074 CCDC146Q8IYE0 955 aa24.25■■□□□ 1.47
PHGDH-209ENST00000641074 PHF8Q9UPP1 1060 aa24.25■■□□□ 1.47
PHGDH-209ENST00000641074 TTC21AQ8NDW8 1320 aa24.25■■□□□ 1.47
PHGDH-209ENST00000641074 AATKQ6ZMQ8 1374 aa24.24■■□□□ 1.47
PHGDH-209ENST00000641074 PNPLA6Q8IY17 1366 aa24.24■■□□□ 1.47
PHGDH-209ENST00000641074 C19orf44Q9H6X5 657 aa24.24■■□□□ 1.47
PHGDH-209ENST00000641074 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
PHGDH-209ENST00000641074 OVOS2A0A0J9YW53 1432 aa24.23■■□□□ 1.47
PHGDH-209ENST00000641074 OVOS2Q6IE36 1432 aa24.23■■□□□ 1.47
PHGDH-209ENST00000641074 MAP2P11137 1827 aaKnown RBP24.22■■□□□ 1.47
PHGDH-209ENST00000641074 ESCO1Q5FWF5 840 aa24.22■■□□□ 1.47
PHGDH-209ENST00000641074 SMG6Q86US8 1419 aaKnown RBP24.2■■□□□ 1.47
PHGDH-209ENST00000641074 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
PHGDH-209ENST00000641074 EMILIN1Q9Y6C2 1016 aa24.19■■□□□ 1.46
PHGDH-209ENST00000641074 NCOA3Q9Y6Q9 1424 aa24.19■■□□□ 1.46
PHGDH-209ENST00000641074 NUDCQ9Y266 331 aa24.18■■□□□ 1.46
PHGDH-209ENST00000641074 APAF1O14727 1248 aa24.17■■□□□ 1.46
PHGDH-209ENST00000641074 DIAPH1O60610 1272 aaKnown RBP24.17■■□□□ 1.46
PHGDH-209ENST00000641074 U2AF1L5P0DN76 240 aaPredicted RBP24.17■■□□□ 1.46
PHGDH-209ENST00000641074 U2AF1Q01081 240 aaKnown RBP eCLIP24.17■■□□□ 1.46
PHGDH-209ENST00000641074 RRS1Q15050 365 aaKnown RBP24.17■■□□□ 1.46
PHGDH-209ENST00000641074 ORAI2Q96SN7 254 aa24.17■■□□□ 1.46
PHGDH-209ENST00000641074 PIK3C2AO00443 1686 aa24.17■■□□□ 1.46
PHGDH-209ENST00000641074 USP31Q70CQ4 1352 aa24.17■■□□□ 1.46
PHGDH-209ENST00000641074 PDE3BQ13370 1112 aa24.16■■□□□ 1.46
PHGDH-209ENST00000641074 CDK12Q9NYV4 1490 aaPredicted RBP24.15■■□□□ 1.46
PHGDH-209ENST00000641074 U2SURPO15042 1029 aaKnown RBP24.14■■□□□ 1.46
PHGDH-209ENST00000641074 RUNDC1Q96C34 613 aa24.14■■□□□ 1.46
PHGDH-209ENST00000641074 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.46
PHGDH-209ENST00000641074 ATF3P18847 181 aa24.14■■□□□ 1.45
PHGDH-209ENST00000641074 DCCP43146 1447 aa24.13■■□□□ 1.45
PHGDH-209ENST00000641074 PAK3O75914 559 aaPredicted RBP24.13■■□□□ 1.45
PHGDH-209ENST00000641074 PSME1Q06323 249 aa24.13■■□□□ 1.45
PHGDH-209ENST00000641074 SUPT16HQ9Y5B9 1047 aaKnown RBP24.13■■□□□ 1.45
PHGDH-209ENST00000641074 CDCA7LQ96GN5 454 aa24.12■■□□□ 1.45
PHGDH-209ENST00000641074 ZNF521Q96K83 1311 aa24.12■■□□□ 1.45
PHGDH-209ENST00000641074 ZNF335Q9H4Z2 1342 aaPredicted RBP24.12■■□□□ 1.45
PHGDH-209ENST00000641074 NLRP6P59044 892 aa24.11■■□□□ 1.45
PHGDH-209ENST00000641074 ABTB2Q8N961 1025 aa24.11■■□□□ 1.45
PHGDH-209ENST00000641074 MST1RQ04912 1400 aa24.1■■□□□ 1.45
PHGDH-209ENST00000641074 XIRP1Q702N8 1843 aaKnown RBP24.09■■□□□ 1.45
PHGDH-209ENST00000641074 FOXO3O43524 673 aa24.09■■□□□ 1.45
PHGDH-209ENST00000641074 IQSEC2Q5JU85 1478 aa24.09■■□□□ 1.45
PHGDH-209ENST00000641074 SOX12O15370 315 aa24.08■■□□□ 1.45
PHGDH-209ENST00000641074 NUTM2GQ5VZR2 741 aa24.08■■□□□ 1.45
PHGDH-209ENST00000641074 NGEFQ8N5V2 710 aa24.08■■□□□ 1.45
PHGDH-209ENST00000641074 LRRC7Q96NW7 1537 aa24.08■■□□□ 1.45
PHGDH-209ENST00000641074 USP54Q70EL1 1684 aa24.08■■□□□ 1.45
PHGDH-209ENST00000641074 MSH6P52701 1360 aa24.08■■□□□ 1.45
PHGDH-209ENST00000641074 IL13P35225 146 aa24.08■■□□□ 1.44
PHGDH-209ENST00000641074 CADPS2Q86UW7 1296 aa24.08■■□□□ 1.44
PHGDH-209ENST00000641074 TCP11L2Q8N4U5 519 aa24.08■■□□□ 1.44
PHGDH-209ENST00000641074 MARF1Q9Y4F3 1742 aaKnown RBP24.08■■□□□ 1.44
PHGDH-209ENST00000641074 KIF1AQ12756 1690 aa24.07■■□□□ 1.44
PHGDH-209ENST00000641074 PLEKHF1Q96S99 279 aa24.06■■□□□ 1.44
PHGDH-209ENST00000641074 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
PHGDH-209ENST00000641074 PEAK1Q9H792 1746 aa24.05■■□□□ 1.44
PHGDH-209ENST00000641074 XPCQ01831 940 aaPredicted RBP24.04■■□□□ 1.44
PHGDH-209ENST00000641074 MAP3K19Q56UN5 1328 aa24.04■■□□□ 1.44
PHGDH-209ENST00000641074 GOLGA2Q08379 1002 aa24.03■■□□□ 1.44
PHGDH-209ENST00000641074 RRP7AQ9Y3A4 280 aaKnown RBP24.03■■□□□ 1.44
PHGDH-209ENST00000641074 NEFLP07196 543 aa24.03■■□□□ 1.44
PHGDH-209ENST00000641074 FCHSD2O94868 740 aa24.02■■□□□ 1.44
PHGDH-209ENST00000641074 FKBP8Q14318 412 aa24.02■■□□□ 1.44
PHGDH-209ENST00000641074 NEUROD2Q15784 382 aa24.02■■□□□ 1.44
PHGDH-209ENST00000641074 KRT28Q7Z3Y7 464 aa24.01■■□□□ 1.43
PHGDH-209ENST00000641074 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
PHGDH-209ENST00000641074 WWC1Q8IX03 1113 aa24.01■■□□□ 1.43
PHGDH-209ENST00000641074 RSPH6AQ9H0K4 717 aa24.01■■□□□ 1.43
PHGDH-209ENST00000641074 PNNQ9H307 717 aaKnown RBP24.01■■□□□ 1.43
PHGDH-209ENST00000641074 EIF4A2Q14240 407 aaKnown RBP24■■□□□ 1.43
PHGDH-209ENST00000641074 TRPM3Q9HCF6 1732 aaPredicted RBP23.99■■□□□ 1.43
PHGDH-209ENST00000641074 SBNO1A3KN83 1393 aa23.99■■□□□ 1.43
PHGDH-209ENST00000641074 PHF23Q9BUL5 403 aaPredicted RBP23.99■■□□□ 1.43
PHGDH-209ENST00000641074 MAPK8IP3Q9UPT6 1336 aa23.98■■□□□ 1.43
PHGDH-209ENST00000641074 HMOX1P09601 288 aa23.98■■□□□ 1.43
PHGDH-209ENST00000641074 SLFN5Q08AF3 891 aa23.98■■□□□ 1.43
PHGDH-209ENST00000641074 NCBP3Q53F19 620 aaKnown RBP23.98■■□□□ 1.43
PHGDH-209ENST00000641074 FLT4P35916 1363 aa23.98■■□□□ 1.43
PHGDH-209ENST00000641074 PRKAR2BP31323 418 aa23.97■■□□□ 1.43
PHGDH-209ENST00000641074 CCDC27Q2M243 656 aa23.97■■□□□ 1.43
PHGDH-209ENST00000641074 DUSP27Q5VZP5 1158 aa23.97■■□□□ 1.43
PHGDH-209ENST00000641074 AMPHP49418 695 aa23.96■■□□□ 1.43
PHGDH-209ENST00000641074 SPINK5Q9NQ38 1064 aaPredicted RBP23.96■■□□□ 1.43
PHGDH-209ENST00000641074 TMPOP42166 694 aaKnown RBP23.96■■□□□ 1.43
PHGDH-209ENST00000641074 TRMT2AQ8IZ69 625 aaKnown RBP23.96■■□□□ 1.43
PHGDH-209ENST00000641074 DDX17Q92841 729 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms