RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 ANP32CO43423 234 aa16.16■□□□□ 0.18
KCNMA1-289ENST00000640807 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
KCNMA1-289ENST00000640807 TTC21AQ8NDW8 1320 aa16.15■□□□□ 0.18
KCNMA1-289ENST00000640807 BRD4O60885 1362 aaPredicted RBP16.15■□□□□ 0.18
KCNMA1-289ENST00000640807 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
KCNMA1-289ENST00000640807 NME9Q86XW9 330 aa16.14■□□□□ 0.17
KCNMA1-289ENST00000640807 NLRP6P59044 892 aa16.13■□□□□ 0.17
KCNMA1-289ENST00000640807 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
KCNMA1-289ENST00000640807 FYB1O15117 783 aa16.13■□□□□ 0.17
KCNMA1-289ENST00000640807 MORC1Q86VD1 984 aa16.13■□□□□ 0.17
KCNMA1-289ENST00000640807 COG3Q96JB2 828 aa16.13■□□□□ 0.17
KCNMA1-289ENST00000640807 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
KCNMA1-289ENST00000640807 NUTM2GQ5VZR2 741 aa16.12■□□□□ 0.17
KCNMA1-289ENST00000640807 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
KCNMA1-289ENST00000640807 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
KCNMA1-289ENST00000640807 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
KCNMA1-289ENST00000640807 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
KCNMA1-289ENST00000640807 LRRC59Q96AG4 307 aaKnown RBP16.1■□□□□ 0.17
KCNMA1-289ENST00000640807 NSD2O96028 1365 aa16.1■□□□□ 0.17
KCNMA1-289ENST00000640807 SBNO1A3KN83 1393 aa16.1■□□□□ 0.17
KCNMA1-289ENST00000640807 MON2Q7Z3U7 1717 aa16.09■□□□□ 0.17
KCNMA1-289ENST00000640807 TNNT2P45379 298 aaPredicted RBP16.09■□□□□ 0.17
KCNMA1-289ENST00000640807 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
KCNMA1-289ENST00000640807 ZRANB1Q9UGI0 708 aa16.09■□□□□ 0.17
KCNMA1-289ENST00000640807 SSH2Q76I76 1423 aa16.09■□□□□ 0.17
KCNMA1-289ENST00000640807 SPATA31A3Q5VYP0 1347 aa16.08■□□□□ 0.17
KCNMA1-289ENST00000640807 RALBP1Q15311 655 aa16.08■□□□□ 0.17
KCNMA1-289ENST00000640807 SOX12O15370 315 aa16.08■□□□□ 0.16
KCNMA1-289ENST00000640807 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-289ENST00000640807 ARHGEF10O15013 1369 aa16.07■□□□□ 0.16
KCNMA1-289ENST00000640807 HAP1P54257 671 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-289ENST00000640807 PXDNQ92626 1479 aa16.07■□□□□ 0.16
KCNMA1-289ENST00000640807 TNS3Q68CZ2 1445 aa16.07■□□□□ 0.16
KCNMA1-289ENST00000640807 USP31Q70CQ4 1352 aa16.04■□□□□ 0.16
KCNMA1-289ENST00000640807 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
KCNMA1-289ENST00000640807 AHDC1Q5TGY3 1603 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-289ENST00000640807 KCNH5Q8NCM2 988 aa16.03■□□□□ 0.16
KCNMA1-289ENST00000640807 NRKQ7Z2Y5 1582 aa16.03■□□□□ 0.16
KCNMA1-289ENST00000640807 PARD3Q8TEW0 1356 aa16.02■□□□□ 0.15
KCNMA1-289ENST00000640807 PPM1GO15355 546 aaPredicted RBP16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 HSPA1LP34931 641 aa16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 MIER1Q8N108 512 aa16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 CABLES1Q8TDN4 633 aa16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 PHLPP1O60346 1717 aa16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 ZBTB7CA1YPR0 619 aa16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 GCP02774 474 aa16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 MYBBP1AQ9BQG0 1328 aaKnown RBP16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 TRPM3Q9HCF6 1732 aaPredicted RBP16.01■□□□□ 0.15
KCNMA1-289ENST00000640807 OVOS2A0A0J9YW53 1432 aa16■□□□□ 0.15
KCNMA1-289ENST00000640807 OVOS2Q6IE36 1432 aa16■□□□□ 0.15
KCNMA1-289ENST00000640807 FBLN1P23142 703 aa16■□□□□ 0.15
KCNMA1-289ENST00000640807 PIK3C2AO00443 1686 aa15.99■□□□□ 0.15
KCNMA1-289ENST00000640807 PPP2R1AP30153 589 aa15.99■□□□□ 0.15
KCNMA1-289ENST00000640807 FBXO41Q8TF61 875 aa15.99■□□□□ 0.15
KCNMA1-289ENST00000640807 RRS1Q15050 365 aaKnown RBP15.98■□□□□ 0.15
KCNMA1-289ENST00000640807 USP19O94966 1318 aa15.98■□□□□ 0.15
KCNMA1-289ENST00000640807 ZC3H6P61129 1189 aaKnown RBP15.98■□□□□ 0.15
KCNMA1-289ENST00000640807 AMPHP49418 695 aa15.97■□□□□ 0.15
KCNMA1-289ENST00000640807 MTHFSP49914 203 aa15.97■□□□□ 0.15
KCNMA1-289ENST00000640807 PNPLA6Q8IY17 1366 aa15.97■□□□□ 0.15
KCNMA1-289ENST00000640807 JCADQ9P266 1359 aa15.97■□□□□ 0.15
KCNMA1-289ENST00000640807 ALS2Q96Q42 1657 aa15.97■□□□□ 0.15
KCNMA1-289ENST00000640807 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
KCNMA1-289ENST00000640807 NUTM2BA6NNL0 878 aaPredicted RBP15.96■□□□□ 0.15
KCNMA1-289ENST00000640807 NUTM2EB1AL46 878 aaPredicted RBP15.96■□□□□ 0.15
KCNMA1-289ENST00000640807 NUTM2AQ8IVF1 878 aaPredicted RBP15.96■□□□□ 0.15
KCNMA1-289ENST00000640807 COL16A1Q07092 1604 aaPredicted RBP15.96■□□□□ 0.14
KCNMA1-289ENST00000640807 POLKQ9UBT6 870 aa15.95■□□□□ 0.14
KCNMA1-289ENST00000640807 AATKQ6ZMQ8 1374 aa15.95■□□□□ 0.14
KCNMA1-289ENST00000640807 EMILIN1Q9Y6C2 1016 aa15.95■□□□□ 0.14
KCNMA1-289ENST00000640807 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
KCNMA1-289ENST00000640807 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
KCNMA1-289ENST00000640807 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
KCNMA1-289ENST00000640807 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
KCNMA1-289ENST00000640807 ARHGEF25Q86VW2 580 aa15.92■□□□□ 0.14
KCNMA1-289ENST00000640807 CCER2I3L3R5 266 aa15.92■□□□□ 0.14
KCNMA1-289ENST00000640807 ADAMTS2O95450 1211 aa15.92■□□□□ 0.14
KCNMA1-289ENST00000640807 MED1Q15648 1581 aaPredicted RBP15.91■□□□□ 0.14
KCNMA1-289ENST00000640807 CHRNA2Q15822 529 aa15.9■□□□□ 0.14
KCNMA1-289ENST00000640807 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
KCNMA1-289ENST00000640807 SLIT3O75094 1523 aa15.9■□□□□ 0.14
KCNMA1-289ENST00000640807 SPATA31A6Q5VVP1 1343 aa15.9■□□□□ 0.14
KCNMA1-289ENST00000640807 MAP2P11137 1827 aaKnown RBP15.89■□□□□ 0.13
KCNMA1-289ENST00000640807 FLT4P35916 1363 aa15.89■□□□□ 0.13
KCNMA1-289ENST00000640807 IP6K1Q92551 441 aa15.89■□□□□ 0.13
KCNMA1-289ENST00000640807 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
KCNMA1-289ENST00000640807 USP54Q70EL1 1684 aa15.88■□□□□ 0.13
KCNMA1-289ENST00000640807 HOXC9P31274 260 aa15.88■□□□□ 0.13
KCNMA1-289ENST00000640807 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
KCNMA1-289ENST00000640807 MEX3CQ5U5Q3 659 aaKnown RBP15.88■□□□□ 0.13
KCNMA1-289ENST00000640807 LTV1Q96GA3 475 aaPredicted RBP15.88■□□□□ 0.13
KCNMA1-289ENST00000640807 KIF24Q5T7B8 1368 aa15.88■□□□□ 0.13
KCNMA1-289ENST00000640807 DIAPH1O60610 1272 aaKnown RBP15.87■□□□□ 0.13
KCNMA1-289ENST00000640807 CPDO75976 1380 aa15.87■□□□□ 0.13
KCNMA1-289ENST00000640807 NFAT5O94916 1531 aa15.87■□□□□ 0.13
KCNMA1-289ENST00000640807 CCDC184Q52MB2 194 aa15.87■□□□□ 0.13
KCNMA1-289ENST00000640807 MARF1Q9Y4F3 1742 aaKnown RBP15.87■□□□□ 0.13
KCNMA1-289ENST00000640807 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.13
KCNMA1-289ENST00000640807 RTL1A6NKG5 1358 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms