RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 WASHC2AQ641Q2 1341 aa18.32■□□□□ 0.52
GTF3A-209ENST00000640289 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
GTF3A-209ENST00000640289 ANKRD36BQ8N2N9 1353 aa18.31■□□□□ 0.52
GTF3A-209ENST00000640289 PLEKHG5O94827 1062 aa18.31■□□□□ 0.52
GTF3A-209ENST00000640289 CCDC7Q96M83 1385 aa18.3■□□□□ 0.52
GTF3A-209ENST00000640289 TTC21BQ7Z4L5 1316 aa18.3■□□□□ 0.52
GTF3A-209ENST00000640289 NUTM2GQ5VZR2 741 aa18.3■□□□□ 0.52
GTF3A-209ENST00000640289 AKAP12Q02952 1782 aa18.3■□□□□ 0.52
GTF3A-209ENST00000640289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
GTF3A-209ENST00000640289 ARHGEF10O15013 1369 aa18.29■□□□□ 0.52
GTF3A-209ENST00000640289 BRD4O60885 1362 aaPredicted RBP18.29■□□□□ 0.52
GTF3A-209ENST00000640289 SHPRHQ149N8 1683 aa18.28■□□□□ 0.52
GTF3A-209ENST00000640289 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
GTF3A-209ENST00000640289 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
GTF3A-209ENST00000640289 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
GTF3A-209ENST00000640289 ABTB2Q8N961 1025 aa18.28■□□□□ 0.52
GTF3A-209ENST00000640289 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
GTF3A-209ENST00000640289 MON2Q7Z3U7 1717 aa18.27■□□□□ 0.52
GTF3A-209ENST00000640289 NRKQ7Z2Y5 1582 aa18.27■□□□□ 0.52
GTF3A-209ENST00000640289 EDC4Q6P2E9 1401 aaKnown RBP18.27■□□□□ 0.52
GTF3A-209ENST00000640289 CABLES1Q8TDN4 633 aa18.27■□□□□ 0.52
GTF3A-209ENST00000640289 SPATA31A6Q5VVP1 1343 aa18.26■□□□□ 0.51
GTF3A-209ENST00000640289 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
GTF3A-209ENST00000640289 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
GTF3A-209ENST00000640289 LRP6O75581 1613 aa18.25■□□□□ 0.51
GTF3A-209ENST00000640289 COL22A1Q8NFW1 1626 aaPredicted RBP18.25■□□□□ 0.51
GTF3A-209ENST00000640289 NME9Q86XW9 330 aa18.25■□□□□ 0.51
GTF3A-209ENST00000640289 PANK3Q9H999 370 aa18.25■□□□□ 0.51
GTF3A-209ENST00000640289 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
GTF3A-209ENST00000640289 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
GTF3A-209ENST00000640289 NLRP6P59044 892 aa18.23■□□□□ 0.51
GTF3A-209ENST00000640289 PIK3C2AO00443 1686 aa18.22■□□□□ 0.51
GTF3A-209ENST00000640289 MED1Q15648 1581 aaPredicted RBP18.22■□□□□ 0.51
GTF3A-209ENST00000640289 NLRP13Q86W25 1043 aa18.22■□□□□ 0.51
GTF3A-209ENST00000640289 ADAMTS2O95450 1211 aa18.2■□□□□ 0.5
GTF3A-209ENST00000640289 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
GTF3A-209ENST00000640289 USP19O94966 1318 aa18.2■□□□□ 0.5
GTF3A-209ENST00000640289 USP31Q70CQ4 1352 aa18.18■□□□□ 0.5
GTF3A-209ENST00000640289 FYB1O15117 783 aa18.18■□□□□ 0.5
GTF3A-209ENST00000640289 MEX3CQ5U5Q3 659 aaKnown RBP18.18■□□□□ 0.5
GTF3A-209ENST00000640289 GGNBP2Q9H3C7 697 aa18.18■□□□□ 0.5
GTF3A-209ENST00000640289 ABCA3Q99758 1704 aa18.17■□□□□ 0.5
GTF3A-209ENST00000640289 CRYBG1Q9Y4K1 1723 aa18.17■□□□□ 0.5
GTF3A-209ENST00000640289 SOX12O15370 315 aa18.16■□□□□ 0.5
GTF3A-209ENST00000640289 GCP02774 474 aa18.16■□□□□ 0.5
GTF3A-209ENST00000640289 OVOS2A0A0J9YW53 1432 aa18.15■□□□□ 0.5
GTF3A-209ENST00000640289 OVOS2Q6IE36 1432 aa18.15■□□□□ 0.5
GTF3A-209ENST00000640289 SLIT3O75094 1523 aa18.15■□□□□ 0.5
GTF3A-209ENST00000640289 C8orf37Q96NL8 207 aa18.15■□□□□ 0.5
GTF3A-209ENST00000640289 PHRF1Q9P1Y6 1649 aaKnown RBP18.15■□□□□ 0.5
GTF3A-209ENST00000640289 MARF1Q9Y4F3 1742 aaKnown RBP18.15■□□□□ 0.5
GTF3A-209ENST00000640289 ZNF316A6NFI3 1004 aaPredicted RBP18.14■□□□□ 0.49
GTF3A-209ENST00000640289 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.49
GTF3A-209ENST00000640289 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
GTF3A-209ENST00000640289 COG3Q96JB2 828 aa18.14■□□□□ 0.49
GTF3A-209ENST00000640289 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
GTF3A-209ENST00000640289 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
GTF3A-209ENST00000640289 KIAA0232Q92628 1395 aa18.12■□□□□ 0.49
GTF3A-209ENST00000640289 USP54Q70EL1 1684 aa18.12■□□□□ 0.49
GTF3A-209ENST00000640289 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
GTF3A-209ENST00000640289 FAM83GA6ND36 823 aa18.11■□□□□ 0.49
GTF3A-209ENST00000640289 FBLN1P23142 703 aa18.11■□□□□ 0.49
GTF3A-209ENST00000640289 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
GTF3A-209ENST00000640289 KCNH5Q8NCM2 988 aa18.11■□□□□ 0.49
GTF3A-209ENST00000640289 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
GTF3A-209ENST00000640289 CHRNA2Q15822 529 aa18.1■□□□□ 0.49
GTF3A-209ENST00000640289 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
GTF3A-209ENST00000640289 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
GTF3A-209ENST00000640289 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
GTF3A-209ENST00000640289 NFAT5O94916 1531 aa18.09■□□□□ 0.49
GTF3A-209ENST00000640289 AFF2P51816 1311 aa18.09■□□□□ 0.49
GTF3A-209ENST00000640289 CPDO75976 1380 aa18.08■□□□□ 0.49
GTF3A-209ENST00000640289 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.48
GTF3A-209ENST00000640289 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
GTF3A-209ENST00000640289 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
GTF3A-209ENST00000640289 RGS17Q9UGC6 210 aaPredicted RBP18.07■□□□□ 0.48
GTF3A-209ENST00000640289 NSD2O96028 1365 aa18.06■□□□□ 0.48
GTF3A-209ENST00000640289 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
GTF3A-209ENST00000640289 FNBP4Q8N3X1 1017 aaPredicted RBP18.06■□□□□ 0.48
GTF3A-209ENST00000640289 SLIT2O94813 1529 aa18.05■□□□□ 0.48
GTF3A-209ENST00000640289 TNNT2P45379 298 aaPredicted RBP18.05■□□□□ 0.48
GTF3A-209ENST00000640289 BTG4Q9NY30 223 aa18.05■□□□□ 0.48
GTF3A-209ENST00000640289 BCL9LQ86UU0 1499 aa18.04■□□□□ 0.48
GTF3A-209ENST00000640289 RRS1Q15050 365 aaKnown RBP18.04■□□□□ 0.48
GTF3A-209ENST00000640289 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
GTF3A-209ENST00000640289 USP21Q9UK80 565 aa18.04■□□□□ 0.48
GTF3A-209ENST00000640289 COL14A1Q05707 1796 aaKnown RBP18.03■□□□□ 0.48
GTF3A-209ENST00000640289 MAP3K19Q56UN5 1328 aa18.02■□□□□ 0.48
GTF3A-209ENST00000640289 AXIN2Q9Y2T1 843 aa18.02■□□□□ 0.48
GTF3A-209ENST00000640289 PLCH1Q4KWH8 1693 aa18.02■□□□□ 0.47
GTF3A-209ENST00000640289 AATKQ6ZMQ8 1374 aa18.02■□□□□ 0.47
GTF3A-209ENST00000640289 ZNF772Q68DY9 489 aaPredicted RBP18.01■□□□□ 0.47
GTF3A-209ENST00000640289 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
GTF3A-209ENST00000640289 EMILIN1Q9Y6C2 1016 aa18.01■□□□□ 0.47
GTF3A-209ENST00000640289 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
GTF3A-209ENST00000640289 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
GTF3A-209ENST00000640289 LMO7Q8WWI1 1683 aa18■□□□□ 0.47
GTF3A-209ENST00000640289 CAMTA1Q9Y6Y1 1673 aa18■□□□□ 0.47
GTF3A-209ENST00000640289 POTEAQ6S8J7 498 aa18■□□□□ 0.47
GTF3A-209ENST00000640289 STRN4Q9NRL3 753 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms