RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 PPP1R3GB7ZBB8 358 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 LGR5O75473 907 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 FBXO45P0C2W1 286 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 PLCG2P16885 1265 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 RASA1P20936 1047 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 CANXP27824 592 aaKnown RBP3.82□□□□□ -1.8
HMHB1-202ENST00000638299 ERCC5P28715 1186 aaPredicted RBP3.82□□□□□ -1.8
HMHB1-202ENST00000638299 HDLBPQ00341 1268 aaKnown RBP3.82□□□□□ -1.8
HMHB1-202ENST00000638299 KCNH2Q12809 1159 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 NR1H3Q13133 447 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 ECM1Q16610 540 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 LDLRAD1Q5T700 205 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 FAM200AQ8TCP9 573 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 KHSRPQ92945 711 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMHB1-202ENST00000638299 BACH2Q9BYV9 841 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 PNMA3Q9UL41 463 aa3.82□□□□□ -1.8
HMHB1-202ENST00000638299 COLQQ9Y215 455 aaPredicted RBP3.82□□□□□ -1.8
HMHB1-202ENST00000638299 C19orf67A6NJJ6 358 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 C6orf229H3BNL8 230 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 H3BRB1 525 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 PRMT3O60678 531 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 SLC10A3P09131 477 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 MAPK1P28482 360 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 DPYDQ12882 1025 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 LARP1Q6PKG0 1096 aaKnown RBP3.81□□□□□ -1.8
HMHB1-202ENST00000638299 ANKMY2Q8IV38 441 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 PLEKHM2Q8IWE5 1019 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 ANKRD13AQ8IZ07 590 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 TATDN2Q93075 761 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 PRIMPOLQ96LW4 560 aa3.81□□□□□ -1.8
HMHB1-202ENST00000638299 DNAJC2Q99543 621 aaKnown RBP3.81□□□□□ -1.8
HMHB1-202ENST00000638299 HIRIP3Q9BW71 556 aaPredicted RBP3.81□□□□□ -1.8
HMHB1-202ENST00000638299 CDCA7Q9BWT1 371 aaPredicted RBP3.81□□□□□ -1.8
HMHB1-202ENST00000638299 TUT1Q9H6E5 874 aaKnown RBP3.81□□□□□ -1.8
HMHB1-202ENST00000638299 ZC3H4Q9UPT8 1303 aaKnown RBP3.8□□□□□ -1.8
HMHB1-202ENST00000638299 USP46P62068 366 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 RAD51AP2Q09MP3 1159 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 NCOA4Q13772 614 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 SF3A1Q15459 793 aaKnown RBP3.8□□□□□ -1.8
HMHB1-202ENST00000638299 TSGA10IPQ3SY00 556 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 IER5LQ5T953 404 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 NFATC2IPQ8NCF5 419 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 PIK3R5Q8WYR1 880 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 DHX38Q92620 1227 aaKnown RBP3.8□□□□□ -1.8
HMHB1-202ENST00000638299 LNPKQ9C0E8 428 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 RNF19AQ9NV58 838 aa3.8□□□□□ -1.8
HMHB1-202ENST00000638299 ICMTO60725 284 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 MTMR3Q13615 1198 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 CHRDL2Q6WN34 429 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 CAPN12Q6ZSI9 719 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 PNMA1Q8ND90 353 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 GAS2L2Q8NHY3 880 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 ZNF594Q96JF6 807 aaPredicted RBP3.79□□□□□ -1.8
HMHB1-202ENST00000638299 ASB16Q96NS5 453 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 SEPT3Q9UH03 358 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 BRPF3Q9ULD4 1205 aa3.79□□□□□ -1.8
HMHB1-202ENST00000638299 POTEFA5A3E0 1075 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 ZBBXA8MT70 800 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 DKK1O94907 266 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 NUDT7P0C024 238 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 CLDN10P78369 228 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 MRPL58Q14197 206 aaKnown RBP3.78□□□□□ -1.8
HMHB1-202ENST00000638299 OCLNQ16625 522 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 ASTLQ6HA08 431 aaPredicted RBP3.78□□□□□ -1.8
HMHB1-202ENST00000638299 TAS1R3Q7RTX0 852 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 CERS3Q8IU89 383 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 OGFOD1Q8N543 542 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 FAM161BQ96MY7 647 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 CEP126Q9P2H0 1117 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 KIAA1024Q9UPX6 916 aa3.78□□□□□ -1.8
HMHB1-202ENST00000638299 DNMT3AQ9Y6K1 912 aaPredicted RBP3.78□□□□□ -1.8
HMHB1-202ENST00000638299 ZBTB7BO15156 539 aaPredicted RBP3.77□□□□□ -1.81
HMHB1-202ENST00000638299 P4HBP07237 508 aaKnown RBP3.77□□□□□ -1.81
HMHB1-202ENST00000638299 NCLP19338 710 aaKnown RBP3.77□□□□□ -1.81
HMHB1-202ENST00000638299 ARHGAP4P98171 946 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 FUT2Q10981 343 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 PROX2Q3B8N5 592 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 EAPPQ56P03 285 aaPredicted RBP3.77□□□□□ -1.81
HMHB1-202ENST00000638299 METTL16Q86W50 562 aaKnown RBP3.77□□□□□ -1.81
HMHB1-202ENST00000638299 GLYCTKQ8IVS8 523 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 PHTF2Q8N3S3 785 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 PLPP7Q8NBV4 271 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 C1orf216Q8TAB5 229 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 GTF3C2Q8WUA4 911 aaPredicted RBP3.77□□□□□ -1.81
HMHB1-202ENST00000638299 TINF2Q9BSI4 451 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 TANGO6Q9C0B7 1094 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 PIF1Q9H611 641 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 CXXC1Q9P0U4 656 aaPredicted RBP3.77□□□□□ -1.81
HMHB1-202ENST00000638299 DCTN4Q9UJW0 460 aa3.77□□□□□ -1.81
HMHB1-202ENST00000638299 SBNO2Q9Y2G9 1366 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 ARID4BQ4LE39 1312 aaPredicted RBP3.76□□□□□ -1.81
HMHB1-202ENST00000638299 SFI1A8K8P3 1242 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 TRIM6-TRIM34B2RNG4 842 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 NBPF26B4DH59 902 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 ATP5J2-PTCD1G3V325 749 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 SCAMP3O14828 347 aaKnown RBP3.76□□□□□ -1.81
HMHB1-202ENST00000638299 MARCH6O60337 910 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 SWI5Q1ZZU3 235 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 CCDC144BQ3MJ40 725 aa3.76□□□□□ -1.81
HMHB1-202ENST00000638299 SLFNL1Q499Z3 407 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms